Protein–RNA interactions for Protein: A6NCS4

NKX2-6, Homeobox protein Nkx-2.6, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-6A6NCS4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.15■□□□□ 0.82
NKX2-6A6NCS4 MIR6821-201ENST00000617625 74 ntBASIC20.15■□□□□ 0.82
NKX2-6A6NCS4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
NKX2-6A6NCS4 AC009102.2-201ENST00000606772 1639 ntBASIC20.15■□□□□ 0.82
NKX2-6A6NCS4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-6A6NCS4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-6A6NCS4 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-6A6NCS4 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.14■□□□□ 0.81
NKX2-6A6NCS4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-6A6NCS4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.14■□□□□ 0.81
NKX2-6A6NCS4 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-6A6NCS4 AC027682.1-201ENST00000562846 899 ntBASIC20.14■□□□□ 0.81
NKX2-6A6NCS4 AC087623.3-201ENST00000607047 1098 ntBASIC20.14■□□□□ 0.81
NKX2-6A6NCS4 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-6A6NCS4 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-6A6NCS4 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NKX2-6A6NCS4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
NKX2-6A6NCS4 AC097381.1-201ENST00000429019 1296 ntBASIC20.13■□□□□ 0.81
NKX2-6A6NCS4 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.13■□□□□ 0.81
NKX2-6A6NCS4 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.13■□□□□ 0.81
NKX2-6A6NCS4 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.13■□□□□ 0.81
NKX2-6A6NCS4 SLC6A10P-202ENST00000431994 2058 ntBASIC20.13■□□□□ 0.81
NKX2-6A6NCS4 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NKX2-6A6NCS4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.12■□□□□ 0.81
NKX2-6A6NCS4 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-6A6NCS4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NKX2-6A6NCS4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.12■□□□□ 0.81
NKX2-6A6NCS4 AC099791.1-201ENST00000416440 715 ntBASIC20.12■□□□□ 0.81
NKX2-6A6NCS4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-6A6NCS4 AC011298.3-201ENST00000615796 283 ntBASIC20.12■□□□□ 0.81
NKX2-6A6NCS4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-6A6NCS4 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.12■□□□□ 0.81
NKX2-6A6NCS4 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-6A6NCS4 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-6A6NCS4 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NKX2-6A6NCS4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
NKX2-6A6NCS4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-6A6NCS4 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-6A6NCS4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-6A6NCS4 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NKX2-6A6NCS4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NKX2-6A6NCS4 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
NKX2-6A6NCS4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-6A6NCS4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
NKX2-6A6NCS4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-6A6NCS4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.1■□□□□ 0.81
NKX2-6A6NCS4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.1■□□□□ 0.81
NKX2-6A6NCS4 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
NKX2-6A6NCS4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.1■□□□□ 0.81
NKX2-6A6NCS4 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.1■□□□□ 0.81
NKX2-6A6NCS4 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
NKX2-6A6NCS4 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-6A6NCS4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-6A6NCS4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-6A6NCS4 AL162430.1-201ENST00000480705 870 ntBASIC20.09■□□□□ 0.81
NKX2-6A6NCS4 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.09■□□□□ 0.81
NKX2-6A6NCS4 AL138724.1-201ENST00000606771 1088 ntBASIC20.09■□□□□ 0.81
NKX2-6A6NCS4 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-6A6NCS4 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NKX2-6A6NCS4 AL022069.1-201ENST00000568025 1636 ntBASIC20.09■□□□□ 0.81
NKX2-6A6NCS4 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-6A6NCS4 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-6A6NCS4 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-6A6NCS4 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-6A6NCS4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-6A6NCS4 IRS3P-201ENST00000223076 1006 ntBASIC20.08■□□□□ 0.81
NKX2-6A6NCS4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
NKX2-6A6NCS4 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.08■□□□□ 0.81
NKX2-6A6NCS4 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.08■□□□□ 0.81
NKX2-6A6NCS4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
NKX2-6A6NCS4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
NKX2-6A6NCS4 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.08■□□□□ 0.8
NKX2-6A6NCS4 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-6A6NCS4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-6A6NCS4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-6A6NCS4 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NKX2-6A6NCS4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-6A6NCS4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-6A6NCS4 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-6A6NCS4 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.07■□□□□ 0.8
NKX2-6A6NCS4 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.07■□□□□ 0.8
NKX2-6A6NCS4 AC006455.2-201ENST00000429931 906 ntBASIC20.07■□□□□ 0.8
NKX2-6A6NCS4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.07■□□□□ 0.8
NKX2-6A6NCS4 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.07■□□□□ 0.8
NKX2-6A6NCS4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.07■□□□□ 0.8
NKX2-6A6NCS4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NKX2-6A6NCS4 C17orf82-201ENST00000623772 1530 ntBASIC20.07■□□□□ 0.8
NKX2-6A6NCS4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-6A6NCS4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-6A6NCS4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.06■□□□□ 0.8
NKX2-6A6NCS4 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-6A6NCS4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-6A6NCS4 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.06■□□□□ 0.8
NKX2-6A6NCS4 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-6A6NCS4 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.06■□□□□ 0.8
NKX2-6A6NCS4 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.06■□□□□ 0.8
NKX2-6A6NCS4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NKX2-6A6NCS4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NKX2-6A6NCS4 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.05■□□□□ 0.8
NKX2-6A6NCS4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms