Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
LOC102724428A0A0B4J2F2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
LOC102724428A0A0B4J2F2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC29.32■■■□□ 2.28
LOC102724428A0A0B4J2F2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC29.31■■■□□ 2.28
LOC102724428A0A0B4J2F2 TSPY26P-201ENST00000476365 1326 ntBASIC29.31■■■□□ 2.28
LOC102724428A0A0B4J2F2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
LOC102724428A0A0B4J2F2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC29.31■■■□□ 2.28
LOC102724428A0A0B4J2F2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
LOC102724428A0A0B4J2F2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC29.3■■■□□ 2.28
LOC102724428A0A0B4J2F2 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
LOC102724428A0A0B4J2F2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
LOC102724428A0A0B4J2F2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC29.3■■■□□ 2.28
LOC102724428A0A0B4J2F2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC29.3■■■□□ 2.28
LOC102724428A0A0B4J2F2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
LOC102724428A0A0B4J2F2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
LOC102724428A0A0B4J2F2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC29.3■■■□□ 2.28
LOC102724428A0A0B4J2F2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC29.29■■■□□ 2.28
LOC102724428A0A0B4J2F2 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC29.29■■■□□ 2.28
LOC102724428A0A0B4J2F2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
LOC102724428A0A0B4J2F2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC29.29■■■□□ 2.28
LOC102724428A0A0B4J2F2 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC29.29■■■□□ 2.28
LOC102724428A0A0B4J2F2 NME4-202ENST00000382940 766 ntTSL 3 BASIC29.29■■■□□ 2.28
LOC102724428A0A0B4J2F2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC29.29■■■□□ 2.28
LOC102724428A0A0B4J2F2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC29.29■■■□□ 2.28
LOC102724428A0A0B4J2F2 NME4-211ENST00000620944 1193 ntTSL 2 BASIC29.29■■■□□ 2.28
LOC102724428A0A0B4J2F2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC29.28■■■□□ 2.28
LOC102724428A0A0B4J2F2 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC29.28■■■□□ 2.28
LOC102724428A0A0B4J2F2 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC29.28■■■□□ 2.28
LOC102724428A0A0B4J2F2 SLC47A1P1-202ENST00000449666 945 ntBASIC29.28■■■□□ 2.28
LOC102724428A0A0B4J2F2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC29.28■■■□□ 2.28
LOC102724428A0A0B4J2F2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC29.28■■■□□ 2.28
LOC102724428A0A0B4J2F2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC29.28■■■□□ 2.28
LOC102724428A0A0B4J2F2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC29.28■■■□□ 2.28
LOC102724428A0A0B4J2F2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
LOC102724428A0A0B4J2F2 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC29.27■■■□□ 2.28
LOC102724428A0A0B4J2F2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
LOC102724428A0A0B4J2F2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
LOC102724428A0A0B4J2F2 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC29.27■■■□□ 2.28
LOC102724428A0A0B4J2F2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC29.27■■■□□ 2.28
LOC102724428A0A0B4J2F2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC29.26■■■□□ 2.28
LOC102724428A0A0B4J2F2 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.27
LOC102724428A0A0B4J2F2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC29.26■■■□□ 2.27
LOC102724428A0A0B4J2F2 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC29.26■■■□□ 2.27
LOC102724428A0A0B4J2F2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC29.26■■■□□ 2.27
LOC102724428A0A0B4J2F2 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
LOC102724428A0A0B4J2F2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC29.26■■■□□ 2.27
LOC102724428A0A0B4J2F2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
LOC102724428A0A0B4J2F2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
LOC102724428A0A0B4J2F2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC29.25■■■□□ 2.27
LOC102724428A0A0B4J2F2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
LOC102724428A0A0B4J2F2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
LOC102724428A0A0B4J2F2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
LOC102724428A0A0B4J2F2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC29.25■■■□□ 2.27
LOC102724428A0A0B4J2F2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC29.25■■■□□ 2.27
LOC102724428A0A0B4J2F2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC29.25■■■□□ 2.27
LOC102724428A0A0B4J2F2 AC027612.3-201ENST00000413684 1047 ntBASIC29.25■■■□□ 2.27
LOC102724428A0A0B4J2F2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
LOC102724428A0A0B4J2F2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC29.25■■■□□ 2.27
LOC102724428A0A0B4J2F2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
LOC102724428A0A0B4J2F2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
LOC102724428A0A0B4J2F2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
LOC102724428A0A0B4J2F2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC29.24■■■□□ 2.27
LOC102724428A0A0B4J2F2 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
LOC102724428A0A0B4J2F2 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
LOC102724428A0A0B4J2F2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC29.24■■■□□ 2.27
LOC102724428A0A0B4J2F2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC29.24■■■□□ 2.27
LOC102724428A0A0B4J2F2 AL358852.1-201ENST00000623174 1268 ntBASIC29.24■■■□□ 2.27
LOC102724428A0A0B4J2F2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
LOC102724428A0A0B4J2F2 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC29.23■■■□□ 2.27
LOC102724428A0A0B4J2F2 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
LOC102724428A0A0B4J2F2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
LOC102724428A0A0B4J2F2 AC123595.1-201ENST00000440769 1046 ntBASIC29.23■■■□□ 2.27
LOC102724428A0A0B4J2F2 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC29.23■■■□□ 2.27
LOC102724428A0A0B4J2F2 AICDA-202ENST00000537228 667 ntTSL 5 BASIC29.23■■■□□ 2.27
LOC102724428A0A0B4J2F2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC29.23■■■□□ 2.27
LOC102724428A0A0B4J2F2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
LOC102724428A0A0B4J2F2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC29.22■■■□□ 2.27
LOC102724428A0A0B4J2F2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC29.22■■■□□ 2.27
LOC102724428A0A0B4J2F2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
LOC102724428A0A0B4J2F2 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
LOC102724428A0A0B4J2F2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC29.22■■■□□ 2.27
LOC102724428A0A0B4J2F2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC29.22■■■□□ 2.27
LOC102724428A0A0B4J2F2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC29.22■■■□□ 2.27
LOC102724428A0A0B4J2F2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
LOC102724428A0A0B4J2F2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC29.22■■■□□ 2.27
LOC102724428A0A0B4J2F2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC29.21■■■□□ 2.27
LOC102724428A0A0B4J2F2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC29.21■■■□□ 2.27
LOC102724428A0A0B4J2F2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC29.21■■■□□ 2.27
LOC102724428A0A0B4J2F2 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC29.21■■■□□ 2.27
LOC102724428A0A0B4J2F2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
LOC102724428A0A0B4J2F2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
LOC102724428A0A0B4J2F2 CEBPA-AS1-201ENST00000592982 2198 ntBASIC29.2■■■□□ 2.27
LOC102724428A0A0B4J2F2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC29.2■■■□□ 2.27
LOC102724428A0A0B4J2F2 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC29.2■■■□□ 2.26
LOC102724428A0A0B4J2F2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
LOC102724428A0A0B4J2F2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
LOC102724428A0A0B4J2F2 IGHV3-19-201ENST00000521488 291 ntBASIC29.19■■■□□ 2.26
LOC102724428A0A0B4J2F2 MIR6084-201ENST00000622012 110 ntBASIC29.19■■■□□ 2.26
LOC102724428A0A0B4J2F2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
LOC102724428A0A0B4J2F2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC29.19■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms