Protein–RNA interactions for Protein: A0A0B4J1X8

IGHV3-43, Immunoglobulin heavy variable 3-43, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43A0A0B4J1X8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
IGHV3-43A0A0B4J1X8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.79■□□□□ 0.6
IGHV3-43A0A0B4J1X8 ALDH1A3-203ENST00000557963 1670 ntBASIC18.79■□□□□ 0.6
IGHV3-43A0A0B4J1X8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
IGHV3-43A0A0B4J1X8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGHV3-43A0A0B4J1X8 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IGHV3-43A0A0B4J1X8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGHV3-43A0A0B4J1X8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.77■□□□□ 0.6
IGHV3-43A0A0B4J1X8 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGHV3-43A0A0B4J1X8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
IGHV3-43A0A0B4J1X8 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGHV3-43A0A0B4J1X8 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
IGHV3-43A0A0B4J1X8 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
IGHV3-43A0A0B4J1X8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.77■□□□□ 0.59
IGHV3-43A0A0B4J1X8 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.77■□□□□ 0.59
IGHV3-43A0A0B4J1X8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
IGHV3-43A0A0B4J1X8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
IGHV3-43A0A0B4J1X8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IGHV3-43A0A0B4J1X8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.76■□□□□ 0.59
IGHV3-43A0A0B4J1X8 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IGHV3-43A0A0B4J1X8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
IGHV3-43A0A0B4J1X8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IGHV3-43A0A0B4J1X8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IGHV3-43A0A0B4J1X8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IGHV3-43A0A0B4J1X8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
IGHV3-43A0A0B4J1X8 ANOS2P-203ENST00000472227 1816 ntBASIC18.76■□□□□ 0.59
IGHV3-43A0A0B4J1X8 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
IGHV3-43A0A0B4J1X8 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 AL031848.2-201ENST00000607670 837 ntBASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
IGHV3-43A0A0B4J1X8 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGHV3-43A0A0B4J1X8 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IGHV3-43A0A0B4J1X8 AC068473.5-201ENST00000616428 2072 ntBASIC18.74■□□□□ 0.59
IGHV3-43A0A0B4J1X8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGHV3-43A0A0B4J1X8 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGHV3-43A0A0B4J1X8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC18.74■□□□□ 0.59
IGHV3-43A0A0B4J1X8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC18.74■□□□□ 0.59
IGHV3-43A0A0B4J1X8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC18.74■□□□□ 0.59
IGHV3-43A0A0B4J1X8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGHV3-43A0A0B4J1X8 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.74■□□□□ 0.59
IGHV3-43A0A0B4J1X8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGHV3-43A0A0B4J1X8 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC18.74■□□□□ 0.59
IGHV3-43A0A0B4J1X8 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGHV3-43A0A0B4J1X8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
IGHV3-43A0A0B4J1X8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGHV3-43A0A0B4J1X8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.73■□□□□ 0.59
IGHV3-43A0A0B4J1X8 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IGHV3-43A0A0B4J1X8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IGHV3-43A0A0B4J1X8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IGHV3-43A0A0B4J1X8 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
IGHV3-43A0A0B4J1X8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
IGHV3-43A0A0B4J1X8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
IGHV3-43A0A0B4J1X8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IGHV3-43A0A0B4J1X8 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IGHV3-43A0A0B4J1X8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
IGHV3-43A0A0B4J1X8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC18.72■□□□□ 0.59
IGHV3-43A0A0B4J1X8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
IGHV3-43A0A0B4J1X8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
IGHV3-43A0A0B4J1X8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IGHV3-43A0A0B4J1X8 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IGHV3-43A0A0B4J1X8 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
IGHV3-43A0A0B4J1X8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IGHV3-43A0A0B4J1X8 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.71■□□□□ 0.59
IGHV3-43A0A0B4J1X8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.71■□□□□ 0.59
IGHV3-43A0A0B4J1X8 AC004448.1-201ENST00000458332 883 ntBASIC18.71■□□□□ 0.59
IGHV3-43A0A0B4J1X8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
IGHV3-43A0A0B4J1X8 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IGHV3-43A0A0B4J1X8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IGHV3-43A0A0B4J1X8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.71■□□□□ 0.59
IGHV3-43A0A0B4J1X8 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
IGHV3-43A0A0B4J1X8 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms