Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 TPT1P11-201ENST00000458482 498 ntBASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 RPL13AP20-201ENST00000459725 609 ntBASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 FAM8A2P-201ENST00000528813 1142 ntBASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 MTHFR-210ENST00000641407 2387 ntBASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 CR383656.2-201ENST00000548656 2254 ntBASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 AL354702.1-201ENST00000442006 1960 ntBASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
PARPBPQ9NWS1 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PARPBPQ9NWS1 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
PARPBPQ9NWS1 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
PARPBPQ9NWS1 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.31
PARPBPQ9NWS1 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PARPBPQ9NWS1 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
PARPBPQ9NWS1 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 LINC00552-201ENST00000625151 2579 ntBASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 AC009093.10-201ENST00000641956 1442 ntBASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 MIR326-201ENST00000362220 95 ntBASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 AL354877.1-201ENST00000424412 413 ntBASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 AC103988.2-201ENST00000561804 725 ntBASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 AC100827.2-201ENST00000563214 1194 ntBASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 AC009884.2-201ENST00000603110 324 ntBASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 AL023803.2-201ENST00000620080 638 ntBASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 AGGF1P1-201ENST00000509500 2073 ntBASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
PARPBPQ9NWS1 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.07□□□□□ -0.32
PARPBPQ9NWS1 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PARPBPQ9NWS1 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
PARPBPQ9NWS1 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
PARPBPQ9NWS1 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PARPBPQ9NWS1 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PARPBPQ9NWS1 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
PARPBPQ9NWS1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
PARPBPQ9NWS1 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.07□□□□□ -0.32
PARPBPQ9NWS1 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
PARPBPQ9NWS1 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
PARPBPQ9NWS1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
PARPBPQ9NWS1 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.07□□□□□ -0.32
PARPBPQ9NWS1 AC107918.4-201ENST00000641966 3141 ntBASIC13.07□□□□□ -0.32
PARPBPQ9NWS1 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms