Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AC003102.2-201ENST00000589195 1469 ntBASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 AC005034.1-201ENST00000426657 489 ntBASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 GIMAP3P-201ENST00000495150 836 ntBASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 AC068587.3-201ENST00000526613 355 ntBASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
LIN7CQ9NUP9 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 AC015688.4-201ENST00000580780 1647 ntBASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 KRT8P35-201ENST00000483942 1338 ntBASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 RNU1-114P-201ENST00000365297 166 ntBASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 BAATP1-201ENST00000412284 1225 ntBASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 AC012441.1-201ENST00000446669 685 ntBASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 AL355864.2-201ENST00000447420 863 ntBASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 AC093433.1-201ENST00000458048 571 ntBASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
LIN7CQ9NUP9 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms