Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 WFDC1-204ENST00000613603 549 ntBASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 MIR6799-201ENST00000620297 69 ntBASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
AMBRA1Q9C0C7 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 AC103988.2-201ENST00000561804 725 ntBASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 AC005252.2-201ENST00000624630 1141 ntBASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 MIR497HG-202ENST00000572453 3838 ntBASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
AMBRA1Q9C0C7 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.23
AMBRA1Q9C0C7 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
AMBRA1Q9C0C7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 AL122018.1-201ENST00000446607 2310 ntBASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
AMBRA1Q9C0C7 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms