Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 AL162426.1-201ENST00000624141 743 ntBASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 CCT8L1P-201ENST00000465400 1674 ntBASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
RSPO3Q9BXY4 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 LAP3P2-201ENST00000454686 1454 ntBASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 AL160314.3-201ENST00000556041 767 ntBASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 AL512343.1-201ENST00000605837 169 ntBASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 AC008687.7-202ENST00000637404 953 ntBASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
RSPO3Q9BXY4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 AC144522.1-201ENST00000625111 1658 ntBASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 KRT18P36-201ENST00000411618 1276 ntBASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC13.25□□□□□ -0.29
RSPO3Q9BXY4 AC112492.5-201ENST00000421897 457 ntBASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms