Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
ARID3AQ99856 PRDM16-208ENST00000514189 4236 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ARID3AQ99856 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.71■□□□□ 0.27
ARID3AQ99856 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.71■□□□□ 0.27
ARID3AQ99856 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
ARID3AQ99856 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC16.71■□□□□ 0.27
ARID3AQ99856 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC16.71■□□□□ 0.27
ARID3AQ99856 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ARID3AQ99856 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ARID3AQ99856 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ARID3AQ99856 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ARID3AQ99856 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 AC236430.1-201ENST00000402231 743 ntBASIC16.71■□□□□ 0.27
ARID3AQ99856 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.71■□□□□ 0.27
ARID3AQ99856 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.71■□□□□ 0.27
ARID3AQ99856 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
ARID3AQ99856 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.71■□□□□ 0.27
ARID3AQ99856 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.71■□□□□ 0.27
ARID3AQ99856 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.71■□□□□ 0.27
ARID3AQ99856 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.71■□□□□ 0.27
ARID3AQ99856 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ARID3AQ99856 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ARID3AQ99856 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.71■□□□□ 0.27
ARID3AQ99856 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
ARID3AQ99856 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ARID3AQ99856 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC16.71■□□□□ 0.26
ARID3AQ99856 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
ARID3AQ99856 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC16.7■□□□□ 0.26
ARID3AQ99856 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ARID3AQ99856 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC16.7■□□□□ 0.26
ARID3AQ99856 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.7■□□□□ 0.26
ARID3AQ99856 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ARID3AQ99856 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.7■□□□□ 0.26
ARID3AQ99856 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
ARID3AQ99856 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ARID3AQ99856 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.7■□□□□ 0.26
ARID3AQ99856 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.7■□□□□ 0.26
ARID3AQ99856 TPRX2P-201ENST00000535362 881 ntBASIC16.7■□□□□ 0.26
ARID3AQ99856 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.7■□□□□ 0.26
ARID3AQ99856 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.7■□□□□ 0.26
ARID3AQ99856 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ARID3AQ99856 TRIM80P-201ENST00000455685 2848 ntBASIC16.7■□□□□ 0.26
ARID3AQ99856 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 AC113367.3-201ENST00000508316 1912 ntBASIC16.7■□□□□ 0.26
ARID3AQ99856 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ARID3AQ99856 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC16.7■□□□□ 0.26
ARID3AQ99856 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.7■□□□□ 0.26
ARID3AQ99856 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ARID3AQ99856 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ARID3AQ99856 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ARID3AQ99856 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARID3AQ99856 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC16.69■□□□□ 0.26
ARID3AQ99856 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ARID3AQ99856 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARID3AQ99856 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ARID3AQ99856 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
ARID3AQ99856 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ARID3AQ99856 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC16.69■□□□□ 0.26
ARID3AQ99856 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ARID3AQ99856 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ARID3AQ99856 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ARID3AQ99856 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.69■□□□□ 0.26
ARID3AQ99856 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms