Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 HNRNPA1P27-201ENST00000412087 955 ntBASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 POM121L10P-201ENST00000436994 1285 ntBASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 AC006033.1-201ENST00000440505 426 ntBASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 AL022313.4-201ENST00000562756 2046 ntBASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMARCC2Q8TAQ2 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 AC099548.2-209ENST00000480264 625 ntBASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 AC007663.3-201ENST00000609632 465 ntBASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 AC023794.5-201ENST00000564380 2157 ntBASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 AC020907.1-201ENST00000616460 1350 ntBASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMARCC2Q8TAQ2 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 E2F3P2-201ENST00000447755 1422 ntBASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 AC021723.1-201ENST00000486306 515 ntBASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 AC005730.2-201ENST00000564549 1184 ntBASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 MIR4783-201ENST00000580343 82 ntBASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SMARCC2Q8TAQ2 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms