Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 AC015656.1-201ENST00000624209 3578 ntBASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 AC103592.1-201ENST00000394513 664 ntBASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 TMEM198B-204ENST00000484016 896 ntBASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
NEDD1Q8NHV4 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 SHMT1P1-201ENST00000419974 1312 ntBASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 MIR645-201ENST00000385283 94 ntBASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 FGFR3P1-201ENST00000449999 601 ntBASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 AC067931.2-201ENST00000623655 2003 ntBASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NEDD1Q8NHV4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 TUBB8P4-201ENST00000511806 1324 ntBASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 USP17L6P-201ENST00000382470 1197 ntBASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 MIR4522-201ENST00000584932 87 ntBASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 AC005632.3-201ENST00000605544 308 ntBASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC16.74■□□□□ 0.27
NEDD1Q8NHV4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms