Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 ACTBP14-201ENST00000411655 1089 ntBASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 YY1P2-201ENST00000438766 948 ntBASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 AC100858.1-201ENST00000514059 1228 ntBASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 MT3-202ENST00000561640 514 ntTSL 3 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 AC009041.4-201ENST00000620075 638 ntBASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 HPD-204ENST00000543163 1709 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 AC113367.3-201ENST00000508316 1912 ntBASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 RHOC-205ENST00000369636 786 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 KRT8P6-201ENST00000399259 1207 ntBASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 RPL15-205ENST00000415719 830 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 EEF1DP5-201ENST00000431410 772 ntBASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 AC010900.1-201ENST00000449849 1296 ntBASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 AC120498.7-201ENST00000562876 330 ntBASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 NEK4P3-201ENST00000604859 544 ntBASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 BAK1P2-201ENST00000532665 631 ntBASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 MIR6074-201ENST00000612054 107 ntBASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
VPS13DQ5THJ4 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 HSPA8P5-201ENST00000456928 2069 ntBASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 SALL4P6-201ENST00000429385 1691 ntBASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 CDK4P1-201ENST00000454213 828 ntBASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 AC089987.1-201ENST00000551654 2209 ntBASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
VPS13DQ5THJ4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms