Protein–RNA interactions for Protein: Q00610

CLTC, Clathrin heavy chain 1, humanhuman

Known RBP Predictions only

Length 1,675 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCQ00610 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTCQ00610 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTCQ00610 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTCQ00610 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC20.29■□□□□ 0.84
CLTCQ00610 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC20.29■□□□□ 0.84
CLTCQ00610 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CLTCQ00610 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC20.29■□□□□ 0.84
CLTCQ00610 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTCQ00610 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTCQ00610 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CLTCQ00610 GSN-209ENST00000449733 2702 ntTSL 2 BASIC20.29■□□□□ 0.84
CLTCQ00610 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTCQ00610 CCL19-202ENST00000378800 414 ntTSL 2 BASIC20.29■□□□□ 0.84
CLTCQ00610 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC20.29■□□□□ 0.84
CLTCQ00610 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTCQ00610 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC20.29■□□□□ 0.84
CLTCQ00610 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC20.29■□□□□ 0.84
CLTCQ00610 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CLTCQ00610 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC20.28■□□□□ 0.84
CLTCQ00610 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
CLTCQ00610 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC20.28■□□□□ 0.84
CLTCQ00610 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC20.28■□□□□ 0.84
CLTCQ00610 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CLTCQ00610 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC20.28■□□□□ 0.84
CLTCQ00610 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLTCQ00610 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CLTCQ00610 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLTCQ00610 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLTCQ00610 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLTCQ00610 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLTCQ00610 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CLTCQ00610 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CLTCQ00610 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLTCQ00610 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC20.28■□□□□ 0.84
CLTCQ00610 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC20.28■□□□□ 0.84
CLTCQ00610 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC20.28■□□□□ 0.84
CLTCQ00610 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC20.28■□□□□ 0.84
CLTCQ00610 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC20.28■□□□□ 0.84
CLTCQ00610 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CLTCQ00610 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC20.28■□□□□ 0.84
CLTCQ00610 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC20.28■□□□□ 0.84
CLTCQ00610 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLTCQ00610 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLTCQ00610 AJ011931.1-201ENST00000618749 2492 ntBASIC20.28■□□□□ 0.84
CLTCQ00610 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CLTCQ00610 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CLTCQ00610 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
CLTCQ00610 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTCQ00610 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTCQ00610 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTCQ00610 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CLTCQ00610 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC20.27■□□□□ 0.84
CLTCQ00610 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTCQ00610 HPD-204ENST00000543163 1709 ntTSL 5 BASIC20.27■□□□□ 0.84
CLTCQ00610 HSD3BP1-201ENST00000286193 1111 ntBASIC20.27■□□□□ 0.84
CLTCQ00610 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC20.27■□□□□ 0.84
CLTCQ00610 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CLTCQ00610 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC20.27■□□□□ 0.84
CLTCQ00610 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLTCQ00610 RN7SKP212-201ENST00000410851 328 ntBASIC20.27■□□□□ 0.84
CLTCQ00610 KRT18P15-201ENST00000458108 1291 ntBASIC20.27■□□□□ 0.84
CLTCQ00610 RNA5SP288-201ENST00000516075 93 ntBASIC20.27■□□□□ 0.84
CLTCQ00610 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC20.27■□□□□ 0.84
CLTCQ00610 RN7SL480P-201ENST00000581481 294 ntBASIC20.27■□□□□ 0.84
CLTCQ00610 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLTCQ00610 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CLTCQ00610 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CLTCQ00610 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLTCQ00610 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CLTCQ00610 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CLTCQ00610 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC20.27■□□□□ 0.84
CLTCQ00610 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC20.27■□□□□ 0.83
CLTCQ00610 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CLTCQ00610 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CLTCQ00610 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLTCQ00610 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLTCQ00610 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLTCQ00610 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLTCQ00610 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
CLTCQ00610 AC041040.1-201ENST00000425197 460 ntBASIC20.26■□□□□ 0.83
CLTCQ00610 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC20.26■□□□□ 0.83
CLTCQ00610 AL954722.1-201ENST00000431238 259 ntBASIC20.26■□□□□ 0.83
CLTCQ00610 OR4C14P-201ENST00000440929 923 ntBASIC20.26■□□□□ 0.83
CLTCQ00610 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC20.26■□□□□ 0.83
CLTCQ00610 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC20.26■□□□□ 0.83
CLTCQ00610 AC090907.2-201ENST00000559857 720 ntTSL 3 BASIC20.26■□□□□ 0.83
CLTCQ00610 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC20.26■□□□□ 0.83
CLTCQ00610 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC20.26■□□□□ 0.83
CLTCQ00610 CBR3-AS1-210ENST00000623484 392 ntTSL 5 BASIC20.26■□□□□ 0.83
CLTCQ00610 CBR3-AS1-215ENST00000624086 594 ntTSL 5 BASIC20.26■□□□□ 0.83
CLTCQ00610 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CLTCQ00610 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC20.26■□□□□ 0.83
CLTCQ00610 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CLTCQ00610 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLTCQ00610 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLTCQ00610 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLTCQ00610 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC20.26■□□□□ 0.83
CLTCQ00610 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CLTCQ00610 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CLTCQ00610 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms