Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC8.59□□□□□ -1.04
HSPG2P98160 GULOP-201ENST00000454030 748 ntBASIC8.59□□□□□ -1.04
HSPG2P98160 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC8.59□□□□□ -1.04
HSPG2P98160 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC8.59□□□□□ -1.04
HSPG2P98160 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.04
HSPG2P98160 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC8.59□□□□□ -1.04
HSPG2P98160 SMIM22-207ENST00000589721 822 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
HSPG2P98160 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC8.59□□□□□ -1.04
HSPG2P98160 LINC00554-201ENST00000564841 3011 ntBASIC8.58□□□□□ -1.04
HSPG2P98160 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
HSPG2P98160 AC068760.1-201ENST00000493579 1953 ntBASIC8.58□□□□□ -1.04
HSPG2P98160 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
HSPG2P98160 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC8.58□□□□□ -1.04
HSPG2P98160 TUBB4AP1-201ENST00000450755 1325 ntBASIC8.58□□□□□ -1.04
HSPG2P98160 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 AC126365.1-201ENST00000578585 1514 ntBASIC8.58□□□□□ -1.04
HSPG2P98160 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC8.58□□□□□ -1.04
HSPG2P98160 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC8.58□□□□□ -1.04
HSPG2P98160 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC8.58□□□□□ -1.04
HSPG2P98160 PHBP3-201ENST00000412562 819 ntBASIC8.58□□□□□ -1.04
HSPG2P98160 HNRNPA1P68-201ENST00000425806 979 ntBASIC8.58□□□□□ -1.04
HSPG2P98160 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC8.58□□□□□ -1.04
HSPG2P98160 RN7SL789P-201ENST00000478944 293 ntBASIC8.58□□□□□ -1.04
HSPG2P98160 AP001979.1-201ENST00000529222 751 ntBASIC8.58□□□□□ -1.04
HSPG2P98160 BCAR1P1-201ENST00000553953 636 ntBASIC8.58□□□□□ -1.04
HSPG2P98160 AC104759.1-201ENST00000559109 939 ntBASIC8.58□□□□□ -1.04
HSPG2P98160 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
HSPG2P98160 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC8.58□□□□□ -1.04
HSPG2P98160 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC8.58□□□□□ -1.04
HSPG2P98160 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC8.58□□□□□ -1.04
HSPG2P98160 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC8.58□□□□□ -1.04
HSPG2P98160 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
HSPG2P98160 AC116347.1-201ENST00000442824 720 ntBASIC8.58□□□□□ -1.04
HSPG2P98160 BICD1P1-201ENST00000457832 1222 ntBASIC8.58□□□□□ -1.04
HSPG2P98160 EEF1GP2-201ENST00000509352 1243 ntBASIC8.58□□□□□ -1.04
HSPG2P98160 HAX1-211ENST00000532105 771 ntTSL 3 BASIC8.58□□□□□ -1.04
HSPG2P98160 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC8.58□□□□□ -1.04
HSPG2P98160 AL161937.2-201ENST00000615503 403 ntTSL 2 BASIC8.58□□□□□ -1.04
HSPG2P98160 AC006511.4-201ENST00000631571 561 ntTSL 3 BASIC8.58□□□□□ -1.04
HSPG2P98160 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC8.58□□□□□ -1.04
HSPG2P98160 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC8.58□□□□□ -1.04
HSPG2P98160 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
HSPG2P98160 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC8.58□□□□□ -1.04
HSPG2P98160 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC8.58□□□□□ -1.04
HSPG2P98160 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 RPS6-201ENST00000315377 863 ntTSL 3 BASIC8.58□□□□□ -1.04
HSPG2P98160 APOO-201ENST00000379226 1118 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 FAM178B-201ENST00000393526 1004 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 AL049542.1-201ENST00000430231 278 ntBASIC8.58□□□□□ -1.04
HSPG2P98160 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 ACP1-207ENST00000439645 605 ntTSL 2 BASIC8.58□□□□□ -1.04
HSPG2P98160 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC8.58□□□□□ -1.04
HSPG2P98160 AL512310.5-201ENST00000551999 515 ntBASIC8.58□□□□□ -1.04
HSPG2P98160 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC8.58□□□□□ -1.04
HSPG2P98160 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC8.58□□□□□ -1.04
HSPG2P98160 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
HSPG2P98160 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
HSPG2P98160 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC8.57□□□□□ -1.04
HSPG2P98160 HFE-205ENST00000352392 653 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC8.57□□□□□ -1.04
HSPG2P98160 SERPINB8P1-201ENST00000401898 377 ntBASIC8.57□□□□□ -1.04
HSPG2P98160 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 AC105443.1-201ENST00000433754 712 ntBASIC8.57□□□□□ -1.04
HSPG2P98160 AC114812.4-201ENST00000506676 757 ntBASIC8.57□□□□□ -1.04
HSPG2P98160 FOS-205ENST00000555242 629 ntTSL 2 BASIC8.57□□□□□ -1.04
HSPG2P98160 AC005586.2-201ENST00000563946 837 ntBASIC8.57□□□□□ -1.04
HSPG2P98160 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC8.57□□□□□ -1.04
HSPG2P98160 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC8.57□□□□□ -1.04
HSPG2P98160 AC008622.3-201ENST00000621170 600 ntBASIC8.57□□□□□ -1.04
HSPG2P98160 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 TAGLN3-205ENST00000478951 1301 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC8.57□□□□□ -1.04
HSPG2P98160 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC8.57□□□□□ -1.04
HSPG2P98160 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC8.57□□□□□ -1.04
HSPG2P98160 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC8.57□□□□□ -1.04
HSPG2P98160 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
HSPG2P98160 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
HSPG2P98160 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms