Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
VBP1P61758 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 KRT8P23-201ENST00000560090 1207 ntBASIC13.06□□□□□ -0.32
VBP1P61758 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
VBP1P61758 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.06□□□□□ -0.32
VBP1P61758 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.06□□□□□ -0.32
VBP1P61758 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.06□□□□□ -0.32
VBP1P61758 LINC01115-203ENST00000606068 577 ntBASIC13.06□□□□□ -0.32
VBP1P61758 AL513190.1-201ENST00000621254 727 ntBASIC13.06□□□□□ -0.32
VBP1P61758 LINC00628-201ENST00000628516 1289 ntBASIC13.06□□□□□ -0.32
VBP1P61758 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 AC012531.1-201ENST00000562848 2680 ntBASIC13.06□□□□□ -0.32
VBP1P61758 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
VBP1P61758 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.06□□□□□ -0.32
VBP1P61758 SALL4P5-201ENST00000419001 1760 ntBASIC13.06□□□□□ -0.32
VBP1P61758 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
VBP1P61758 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
VBP1P61758 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC13.06□□□□□ -0.32
VBP1P61758 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
VBP1P61758 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC13.06□□□□□ -0.32
VBP1P61758 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
VBP1P61758 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
VBP1P61758 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 AC110048.1-201ENST00000604293 2157 ntBASIC13.05□□□□□ -0.32
VBP1P61758 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 GHET1-201ENST00000627071 1906 ntBASIC13.05□□□□□ -0.32
VBP1P61758 PAX8-202ENST00000263335 3735 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC13.05□□□□□ -0.32
VBP1P61758 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
VBP1P61758 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
VBP1P61758 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.05□□□□□ -0.32
VBP1P61758 TP73-201ENST00000346387 4854 ntTSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.05□□□□□ -0.32
VBP1P61758 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 SPDYE11-202ENST00000450699 704 ntBASIC13.05□□□□□ -0.32
VBP1P61758 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 AC079140.1-201ENST00000508039 487 ntBASIC13.05□□□□□ -0.32
VBP1P61758 AC079776.4-201ENST00000511039 504 ntBASIC13.05□□□□□ -0.32
VBP1P61758 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.05□□□□□ -0.32
VBP1P61758 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.05□□□□□ -0.32
VBP1P61758 SPDYE9P-201ENST00000570642 692 ntBASIC13.05□□□□□ -0.32
VBP1P61758 AC025048.3-201ENST00000590609 569 ntBASIC13.05□□□□□ -0.32
VBP1P61758 AL133215.2-201ENST00000609242 977 ntBASIC13.05□□□□□ -0.32
VBP1P61758 SPDYE10P-202ENST00000612005 668 ntBASIC13.05□□□□□ -0.32
VBP1P61758 SPDYE8P-202ENST00000612377 668 ntBASIC13.05□□□□□ -0.32
VBP1P61758 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.05□□□□□ -0.32
VBP1P61758 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 AC005702.4-201ENST00000618393 416 ntBASIC13.05□□□□□ -0.32
VBP1P61758 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 FTO-214ENST00000636218 2227 ntTSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC13.05□□□□□ -0.32
VBP1P61758 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC13.05□□□□□ -0.32
VBP1P61758 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
VBP1P61758 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
VBP1P61758 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.05□□□□□ -0.32
VBP1P61758 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.05□□□□□ -0.32
VBP1P61758 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 AGGF1P10-201ENST00000635005 2191 ntBASIC13.04□□□□□ -0.32
VBP1P61758 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.04□□□□□ -0.32
VBP1P61758 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.04□□□□□ -0.32
VBP1P61758 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
VBP1P61758 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms