Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN8P56748 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.83□□□□□ -0.2
CLDN8P56748 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.83□□□□□ -0.2
CLDN8P56748 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CLDN8P56748 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLDN8P56748 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CLDN8P56748 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CLDN8P56748 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN8P56748 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CLDN8P56748 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN8P56748 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN8P56748 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN8P56748 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN8P56748 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.82□□□□□ -0.2
CLDN8P56748 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN8P56748 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN8P56748 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN8P56748 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CLDN8P56748 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN8P56748 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CLDN8P56748 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 AC010141.1-201ENST00000411585 623 ntBASIC13.82□□□□□ -0.2
CLDN8P56748 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.82□□□□□ -0.2
CLDN8P56748 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.82□□□□□ -0.2
CLDN8P56748 AC016694.1-201ENST00000434179 700 ntBASIC13.82□□□□□ -0.2
CLDN8P56748 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN8P56748 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN8P56748 BCRP2-202ENST00000447763 634 ntBASIC13.82□□□□□ -0.2
CLDN8P56748 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 RN7SL752P-201ENST00000463779 287 ntBASIC13.82□□□□□ -0.2
CLDN8P56748 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC13.82□□□□□ -0.2
CLDN8P56748 USP32P1-208ENST00000506594 1164 ntBASIC13.82□□□□□ -0.2
CLDN8P56748 BCRP6-201ENST00000510112 632 ntBASIC13.82□□□□□ -0.2
CLDN8P56748 BCRP7-201ENST00000511549 544 ntBASIC13.82□□□□□ -0.2
CLDN8P56748 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CLDN8P56748 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN8P56748 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.82□□□□□ -0.2
CLDN8P56748 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN8P56748 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.82□□□□□ -0.2
CLDN8P56748 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.82□□□□□ -0.2
CLDN8P56748 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CLDN8P56748 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CLDN8P56748 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CLDN8P56748 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 TCAF1P1-201ENST00000414990 2232 ntBASIC13.82□□□□□ -0.2
CLDN8P56748 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.82□□□□□ -0.2
CLDN8P56748 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLDN8P56748 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN8P56748 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN8P56748 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN8P56748 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN8P56748 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN8P56748 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN8P56748 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN8P56748 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN8P56748 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN8P56748 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.81□□□□□ -0.2
CLDN8P56748 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN8P56748 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CLDN8P56748 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN8P56748 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN8P56748 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN8P56748 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN8P56748 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN8P56748 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CLDN8P56748 SNX21-203ENST00000372541 771 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN8P56748 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN8P56748 CNN2P8-201ENST00000421872 913 ntBASIC13.81□□□□□ -0.2
CLDN8P56748 FTH1P14-201ENST00000482930 551 ntBASIC13.81□□□□□ -0.2
CLDN8P56748 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN8P56748 AC078819.1-201ENST00000547454 765 ntBASIC13.81□□□□□ -0.2
CLDN8P56748 AC012085.1-201ENST00000548270 765 ntBASIC13.81□□□□□ -0.2
CLDN8P56748 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.81□□□□□ -0.2
CLDN8P56748 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.81□□□□□ -0.2
CLDN8P56748 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.81□□□□□ -0.2
CLDN8P56748 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLDN8P56748 AC233724.13-201ENST00000598383 410 ntBASIC13.81□□□□□ -0.2
CLDN8P56748 AL022328.1-201ENST00000610050 478 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms