Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH13P55290 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CDH13P55290 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CDH13P55290 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 KRT8P28-201ENST00000433288 1390 ntBASIC14.26□□□□□ -0.13
CDH13P55290 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDH13P55290 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CDH13P55290 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.26□□□□□ -0.13
CDH13P55290 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 AP006294.1-201ENST00000415407 339 ntBASIC14.26□□□□□ -0.13
CDH13P55290 CRB3P1-201ENST00000449338 276 ntBASIC14.26□□□□□ -0.13
CDH13P55290 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.26□□□□□ -0.13
CDH13P55290 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.26□□□□□ -0.13
CDH13P55290 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.26□□□□□ -0.13
CDH13P55290 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.26□□□□□ -0.13
CDH13P55290 MIR4683-201ENST00000579659 81 ntBASIC14.26□□□□□ -0.13
CDH13P55290 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH13P55290 OR10B1P-201ENST00000601666 907 ntBASIC14.26□□□□□ -0.13
CDH13P55290 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH13P55290 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDH13P55290 AL031595.1-201ENST00000623969 4709 ntBASIC14.26□□□□□ -0.13
CDH13P55290 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CDH13P55290 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH13P55290 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH13P55290 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH13P55290 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH13P55290 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH13P55290 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH13P55290 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
CDH13P55290 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH13P55290 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH13P55290 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CDH13P55290 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 AC004945.1-201ENST00000416738 983 ntBASIC14.25□□□□□ -0.13
CDH13P55290 AL355864.2-201ENST00000447420 863 ntBASIC14.25□□□□□ -0.13
CDH13P55290 RN7SL837P-201ENST00000463010 287 ntBASIC14.25□□□□□ -0.13
CDH13P55290 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH13P55290 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.25□□□□□ -0.13
CDH13P55290 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.25□□□□□ -0.13
CDH13P55290 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH13P55290 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CDH13P55290 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDH13P55290 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDH13P55290 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.25□□□□□ -0.13
CDH13P55290 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH13P55290 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH13P55290 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
CDH13P55290 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.24□□□□□ -0.13
CDH13P55290 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CDH13P55290 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 AL022313.4-201ENST00000562756 2046 ntBASIC14.24□□□□□ -0.13
CDH13P55290 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 TUBB8P4-201ENST00000511806 1324 ntBASIC14.24□□□□□ -0.13
CDH13P55290 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CDH13P55290 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms