Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
PMS1P54277 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PMS1P54277 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.97■□□□□ 0.15
PMS1P54277 AC079776.1-201ENST00000401540 1152 ntBASIC15.97■□□□□ 0.15
PMS1P54277 AC112492.5-201ENST00000421897 457 ntBASIC15.97■□□□□ 0.15
PMS1P54277 KRT17P7-201ENST00000451704 1104 ntBASIC15.97■□□□□ 0.15
PMS1P54277 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PMS1P54277 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PMS1P54277 CTBP2P5-201ENST00000454986 1264 ntBASIC15.97■□□□□ 0.15
PMS1P54277 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.97■□□□□ 0.15
PMS1P54277 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC15.97■□□□□ 0.15
PMS1P54277 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
PMS1P54277 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.97■□□□□ 0.15
PMS1P54277 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PMS1P54277 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.97■□□□□ 0.15
PMS1P54277 AL512343.1-201ENST00000605837 169 ntBASIC15.97■□□□□ 0.15
PMS1P54277 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.97■□□□□ 0.15
PMS1P54277 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PMS1P54277 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.97■□□□□ 0.15
PMS1P54277 REXO1L6P-201ENST00000603433 1515 ntBASIC15.97■□□□□ 0.15
PMS1P54277 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
PMS1P54277 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.97■□□□□ 0.15
PMS1P54277 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PMS1P54277 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
PMS1P54277 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.97■□□□□ 0.15
PMS1P54277 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PMS1P54277 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PMS1P54277 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.97■□□□□ 0.15
PMS1P54277 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.97■□□□□ 0.15
PMS1P54277 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.97■□□□□ 0.15
PMS1P54277 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PMS1P54277 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.97■□□□□ 0.15
PMS1P54277 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.96■□□□□ 0.15
PMS1P54277 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.96■□□□□ 0.15
PMS1P54277 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.96■□□□□ 0.15
PMS1P54277 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 AC015818.8-201ENST00000587907 1519 ntBASIC15.96■□□□□ 0.15
PMS1P54277 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.96■□□□□ 0.15
PMS1P54277 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
PMS1P54277 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC15.96■□□□□ 0.15
PMS1P54277 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.96■□□□□ 0.15
PMS1P54277 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.96■□□□□ 0.15
PMS1P54277 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
PMS1P54277 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC15.96■□□□□ 0.15
PMS1P54277 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.96■□□□□ 0.15
PMS1P54277 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.96■□□□□ 0.15
PMS1P54277 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.96■□□□□ 0.15
PMS1P54277 LINC02084-201ENST00000606069 1096 ntBASIC15.96■□□□□ 0.15
PMS1P54277 AC012645.4-201ENST00000610691 1061 ntBASIC15.96■□□□□ 0.15
PMS1P54277 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PMS1P54277 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.96■□□□□ 0.15
PMS1P54277 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC15.96■□□□□ 0.15
PMS1P54277 CETP-203ENST00000566128 1733 ntTSL 5 BASIC15.96■□□□□ 0.15
PMS1P54277 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PMS1P54277 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PMS1P54277 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
PMS1P54277 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PMS1P54277 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PMS1P54277 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
PMS1P54277 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PMS1P54277 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.14
PMS1P54277 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PMS1P54277 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
PMS1P54277 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.96■□□□□ 0.14
PMS1P54277 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PMS1P54277 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.95■□□□□ 0.14
PMS1P54277 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PMS1P54277 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.95■□□□□ 0.14
PMS1P54277 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
PMS1P54277 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PMS1P54277 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 RBM38-204ENST00000371219 760 ntTSL 2 BASIC15.95■□□□□ 0.14
PMS1P54277 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.95■□□□□ 0.14
PMS1P54277 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PMS1P54277 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.95■□□□□ 0.14
PMS1P54277 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms