Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.58□□□□□ -0.24
EFNA3P52797 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.58□□□□□ -0.24
EFNA3P52797 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.58□□□□□ -0.24
EFNA3P52797 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNA3P52797 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.58□□□□□ -0.24
EFNA3P52797 AC124068.2-201ENST00000569473 1109 ntBASIC13.58□□□□□ -0.24
EFNA3P52797 AC020922.3-201ENST00000595064 547 ntBASIC13.58□□□□□ -0.24
EFNA3P52797 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
EFNA3P52797 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.58□□□□□ -0.24
EFNA3P52797 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNA3P52797 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNA3P52797 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNA3P52797 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
EFNA3P52797 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNA3P52797 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.58□□□□□ -0.24
EFNA3P52797 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.58□□□□□ -0.24
EFNA3P52797 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
EFNA3P52797 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.58□□□□□ -0.24
EFNA3P52797 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
EFNA3P52797 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.58□□□□□ -0.24
EFNA3P52797 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNA3P52797 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNA3P52797 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
EFNA3P52797 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
EFNA3P52797 INTS4P1-203ENST00000641008 3683 ntBASIC13.58□□□□□ -0.24
EFNA3P52797 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
EFNA3P52797 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 AC139749.1-202ENST00000617529 3139 ntBASIC13.57□□□□□ -0.24
EFNA3P52797 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNA3P52797 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
EFNA3P52797 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNA3P52797 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
EFNA3P52797 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
EFNA3P52797 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
EFNA3P52797 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
EFNA3P52797 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
EFNA3P52797 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
EFNA3P52797 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC13.57□□□□□ -0.24
EFNA3P52797 AL161932.2-201ENST00000435436 679 ntBASIC13.57□□□□□ -0.24
EFNA3P52797 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.57□□□□□ -0.24
EFNA3P52797 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.57□□□□□ -0.24
EFNA3P52797 Z97180.1-201ENST00000445173 988 ntBASIC13.57□□□□□ -0.24
EFNA3P52797 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNA3P52797 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.57□□□□□ -0.24
EFNA3P52797 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNA3P52797 AC245884.6-201ENST00000515672 1067 ntBASIC13.57□□□□□ -0.24
EFNA3P52797 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNA3P52797 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.57□□□□□ -0.24
EFNA3P52797 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNA3P52797 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC13.57□□□□□ -0.24
EFNA3P52797 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.57□□□□□ -0.24
EFNA3P52797 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNA3P52797 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 AC079336.7-201ENST00000623428 1078 ntBASIC13.57□□□□□ -0.24
EFNA3P52797 AC068587.10-201ENST00000641210 219 ntBASIC13.57□□□□□ -0.24
EFNA3P52797 NAP1L6-202ENST00000641404 1222 ntBASIC13.57□□□□□ -0.24
EFNA3P52797 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNA3P52797 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.57□□□□□ -0.24
EFNA3P52797 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
EFNA3P52797 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 AC015909.3-201ENST00000572855 1794 ntBASIC13.57□□□□□ -0.24
EFNA3P52797 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
EFNA3P52797 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
EFNA3P52797 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 AP002353.1-201ENST00000528257 1599 ntBASIC13.57□□□□□ -0.24
EFNA3P52797 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNA3P52797 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.57□□□□□ -0.24
EFNA3P52797 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
EFNA3P52797 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
EFNA3P52797 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.57□□□□□ -0.24
EFNA3P52797 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.57□□□□□ -0.24
EFNA3P52797 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.56□□□□□ -0.24
EFNA3P52797 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.56□□□□□ -0.24
EFNA3P52797 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
EFNA3P52797 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
EFNA3P52797 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms