Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13□□□□□ -0.33
SRP9P49458 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
SRP9P49458 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13□□□□□ -0.33
SRP9P49458 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
SRP9P49458 AC015936.2-201ENST00000593177 259 ntBASIC13□□□□□ -0.33
SRP9P49458 AC010319.3-201ENST00000597028 470 ntBASIC13□□□□□ -0.33
SRP9P49458 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13□□□□□ -0.33
SRP9P49458 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
SRP9P49458 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
SRP9P49458 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
SRP9P49458 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SRP9P49458 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 AL158070.2-201ENST00000623713 1621 ntBASIC12.99□□□□□ -0.33
SRP9P49458 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.99□□□□□ -0.33
SRP9P49458 DMBT1P1-203ENST00000636837 4628 ntBASIC12.99□□□□□ -0.33
SRP9P49458 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC12.99□□□□□ -0.33
SRP9P49458 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SRP9P49458 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
SRP9P49458 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.99□□□□□ -0.33
SRP9P49458 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.99□□□□□ -0.33
SRP9P49458 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC12.99□□□□□ -0.33
SRP9P49458 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.99□□□□□ -0.33
SRP9P49458 ACTG1P3-201ENST00000431775 1114 ntBASIC12.99□□□□□ -0.33
SRP9P49458 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.99□□□□□ -0.33
SRP9P49458 RN7SL837P-201ENST00000463010 287 ntBASIC12.99□□□□□ -0.33
SRP9P49458 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SRP9P49458 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SRP9P49458 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SRP9P49458 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SRP9P49458 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
SRP9P49458 TDH-203ENST00000531764 1110 ntBASIC12.99□□□□□ -0.33
SRP9P49458 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.99□□□□□ -0.33
SRP9P49458 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.99□□□□□ -0.33
SRP9P49458 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.99□□□□□ -0.33
SRP9P49458 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC12.99□□□□□ -0.33
SRP9P49458 SRP9-204ENST00000619790 377 ntTSL 2 BASIC12.99□□□□□ -0.33
SRP9P49458 AC005252.2-201ENST00000624630 1141 ntBASIC12.99□□□□□ -0.33
SRP9P49458 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.99□□□□□ -0.33
SRP9P49458 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
SRP9P49458 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
SRP9P49458 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.99□□□□□ -0.33
SRP9P49458 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.99□□□□□ -0.33
SRP9P49458 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
SRP9P49458 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 CROT-203ENST00000419147 2959 ntTSL 2 BASIC12.99□□□□□ -0.33
SRP9P49458 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
SRP9P49458 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
SRP9P49458 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
SRP9P49458 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.98□□□□□ -0.33
SRP9P49458 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SRP9P49458 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SRP9P49458 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
SRP9P49458 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
SRP9P49458 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.98□□□□□ -0.33
SRP9P49458 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SRP9P49458 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.98□□□□□ -0.33
SRP9P49458 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
SRP9P49458 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.98□□□□□ -0.33
SRP9P49458 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.98□□□□□ -0.33
SRP9P49458 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
SRP9P49458 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms