Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
RFC1P35251 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.35■□□□□ 0.05
RFC1P35251 AC041040.2-201ENST00000622926 2899 ntBASIC15.35■□□□□ 0.05
RFC1P35251 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.35■□□□□ 0.05
RFC1P35251 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.35■□□□□ 0.05
RFC1P35251 SKA2-202ENST00000437036 625 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 GPR53P-205ENST00000457298 1084 ntBASIC15.35■□□□□ 0.05
RFC1P35251 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.35■□□□□ 0.05
RFC1P35251 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
RFC1P35251 DUX4L46-201ENST00000566845 751 ntBASIC15.35■□□□□ 0.05
RFC1P35251 MIR4783-201ENST00000580343 82 ntBASIC15.35■□□□□ 0.05
RFC1P35251 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC15.35■□□□□ 0.05
RFC1P35251 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
RFC1P35251 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RFC1P35251 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.35■□□□□ 0.05
RFC1P35251 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC15.35■□□□□ 0.05
RFC1P35251 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
RFC1P35251 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RFC1P35251 HARS-202ENST00000415192 1401 ntTSL 2 BASIC15.34■□□□□ 0.05
RFC1P35251 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
RFC1P35251 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.34■□□□□ 0.05
RFC1P35251 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.34■□□□□ 0.05
RFC1P35251 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.34■□□□□ 0.05
RFC1P35251 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.34■□□□□ 0.05
RFC1P35251 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.34■□□□□ 0.05
RFC1P35251 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 MIR4741-201ENST00000579822 90 ntBASIC15.34■□□□□ 0.05
RFC1P35251 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.34■□□□□ 0.05
RFC1P35251 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.34■□□□□ 0.05
RFC1P35251 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RFC1P35251 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
RFC1P35251 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.34■□□□□ 0.05
RFC1P35251 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.34■□□□□ 0.05
RFC1P35251 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RFC1P35251 AC005840.4-201ENST00000541242 2494 ntBASIC15.34■□□□□ 0.05
RFC1P35251 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.34■□□□□ 0.05
RFC1P35251 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RFC1P35251 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms