Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.89□□□□□ -0.35
MSR1P21757 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.89□□□□□ -0.35
MSR1P21757 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.89□□□□□ -0.35
MSR1P21757 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.89□□□□□ -0.35
MSR1P21757 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
MSR1P21757 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.89□□□□□ -0.35
MSR1P21757 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.89□□□□□ -0.35
MSR1P21757 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.89□□□□□ -0.35
MSR1P21757 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
MSR1P21757 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.89□□□□□ -0.35
MSR1P21757 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.89□□□□□ -0.35
MSR1P21757 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 MIR326-201ENST00000362220 95 ntBASIC12.89□□□□□ -0.35
MSR1P21757 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.89□□□□□ -0.35
MSR1P21757 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.89□□□□□ -0.35
MSR1P21757 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.89□□□□□ -0.35
MSR1P21757 AC005034.1-201ENST00000426657 489 ntBASIC12.89□□□□□ -0.35
MSR1P21757 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.89□□□□□ -0.35
MSR1P21757 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
MSR1P21757 HIST2H2BB-201ENST00000449108 381 ntBASIC12.89□□□□□ -0.35
MSR1P21757 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.89□□□□□ -0.35
MSR1P21757 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.89□□□□□ -0.35
MSR1P21757 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.89□□□□□ -0.35
MSR1P21757 AP006547.1-201ENST00000563435 692 ntBASIC12.89□□□□□ -0.35
MSR1P21757 AC005586.2-201ENST00000563946 837 ntBASIC12.89□□□□□ -0.35
MSR1P21757 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.89□□□□□ -0.35
MSR1P21757 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.89□□□□□ -0.35
MSR1P21757 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
MSR1P21757 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC12.89□□□□□ -0.35
MSR1P21757 AL512343.1-201ENST00000605837 169 ntBASIC12.89□□□□□ -0.35
MSR1P21757 RPS24-214ENST00000613865 538 ntTSL 5 BASIC12.89□□□□□ -0.35
MSR1P21757 AC008687.7-202ENST00000637404 953 ntBASIC12.89□□□□□ -0.35
MSR1P21757 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
MSR1P21757 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.89□□□□□ -0.35
MSR1P21757 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
MSR1P21757 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.89□□□□□ -0.35
MSR1P21757 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
MSR1P21757 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.89□□□□□ -0.35
MSR1P21757 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
MSR1P21757 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.88□□□□□ -0.35
MSR1P21757 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
MSR1P21757 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
MSR1P21757 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC12.88□□□□□ -0.35
MSR1P21757 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC12.88□□□□□ -0.35
MSR1P21757 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 HNRNPA1P27-201ENST00000412087 955 ntBASIC12.88□□□□□ -0.35
MSR1P21757 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC12.88□□□□□ -0.35
MSR1P21757 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 AC026954.1-201ENST00000429771 1293 ntBASIC12.88□□□□□ -0.35
MSR1P21757 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.88□□□□□ -0.35
MSR1P21757 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.88□□□□□ -0.35
MSR1P21757 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.88□□□□□ -0.35
MSR1P21757 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.88□□□□□ -0.35
MSR1P21757 AC104989.1-201ENST00000519711 778 ntBASIC12.88□□□□□ -0.35
MSR1P21757 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC12.88□□□□□ -0.35
MSR1P21757 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
MSR1P21757 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.88□□□□□ -0.35
MSR1P21757 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.88□□□□□ -0.35
MSR1P21757 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
MSR1P21757 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
MSR1P21757 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
MSR1P21757 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
MSR1P21757 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms