Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 CNN2P10-201ENST00000443067 918 ntBASIC12.92□□□□□ -0.34
CTLA4P16410 HIST2H2BB-201ENST00000449108 381 ntBASIC12.92□□□□□ -0.34
CTLA4P16410 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CTLA4P16410 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.92□□□□□ -0.34
CTLA4P16410 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CTLA4P16410 AC023794.5-201ENST00000564380 2157 ntBASIC12.92□□□□□ -0.34
CTLA4P16410 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CTLA4P16410 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.92□□□□□ -0.34
CTLA4P16410 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTLA4P16410 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CTLA4P16410 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CTLA4P16410 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
CTLA4P16410 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC12.92□□□□□ -0.34
CTLA4P16410 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CTLA4P16410 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTLA4P16410 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTLA4P16410 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTLA4P16410 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
CTLA4P16410 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTLA4P16410 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
CTLA4P16410 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.92□□□□□ -0.34
CTLA4P16410 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.92□□□□□ -0.34
CTLA4P16410 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTLA4P16410 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CTLA4P16410 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.91□□□□□ -0.34
CTLA4P16410 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.91□□□□□ -0.34
CTLA4P16410 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.91□□□□□ -0.34
CTLA4P16410 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC12.91□□□□□ -0.34
CTLA4P16410 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.91□□□□□ -0.34
CTLA4P16410 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.91□□□□□ -0.34
CTLA4P16410 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CTLA4P16410 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.91□□□□□ -0.34
CTLA4P16410 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.91□□□□□ -0.34
CTLA4P16410 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CTLA4P16410 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.91□□□□□ -0.34
CTLA4P16410 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
CTLA4P16410 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.91□□□□□ -0.34
CTLA4P16410 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.91□□□□□ -0.34
CTLA4P16410 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.91□□□□□ -0.34
CTLA4P16410 GAS5-209ENST00000430245 723 ntTSL 3 BASIC12.91□□□□□ -0.34
CTLA4P16410 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.91□□□□□ -0.34
CTLA4P16410 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.91□□□□□ -0.34
CTLA4P16410 RPL7P3-201ENST00000441388 714 ntBASIC12.91□□□□□ -0.34
CTLA4P16410 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.91□□□□□ -0.34
CTLA4P16410 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CTLA4P16410 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC12.91□□□□□ -0.34
CTLA4P16410 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.91□□□□□ -0.34
CTLA4P16410 AP006547.1-201ENST00000563435 692 ntBASIC12.91□□□□□ -0.34
CTLA4P16410 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CTLA4P16410 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.91□□□□□ -0.34
CTLA4P16410 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.91□□□□□ -0.34
CTLA4P16410 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CTLA4P16410 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CTLA4P16410 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.91□□□□□ -0.34
CTLA4P16410 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.91□□□□□ -0.34
CTLA4P16410 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.91□□□□□ -0.34
CTLA4P16410 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CTLA4P16410 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.9□□□□□ -0.34
CTLA4P16410 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTLA4P16410 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTLA4P16410 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
CTLA4P16410 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
CTLA4P16410 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC12.9□□□□□ -0.34
CTLA4P16410 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.9□□□□□ -0.34
CTLA4P16410 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTLA4P16410 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTLA4P16410 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTLA4P16410 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.9□□□□□ -0.34
CTLA4P16410 AGAP10P-201ENST00000454844 2418 ntBASIC12.9□□□□□ -0.34
CTLA4P16410 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.9□□□□□ -0.34
CTLA4P16410 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTLA4P16410 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
CTLA4P16410 E2F3P2-201ENST00000447755 1422 ntBASIC12.9□□□□□ -0.34
CTLA4P16410 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.9□□□□□ -0.34
CTLA4P16410 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms