Protein–RNA interactions for Protein: P09455

RBP1, Retinol-binding protein 1, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBP1P09455 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.36□□□□□ -0.11
RBP1P09455 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.36□□□□□ -0.11
RBP1P09455 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RBP1P09455 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
RBP1P09455 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.36□□□□□ -0.11
RBP1P09455 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RBP1P09455 USP17L6P-201ENST00000382470 1197 ntBASIC14.36□□□□□ -0.11
RBP1P09455 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RBP1P09455 AC005229.1-201ENST00000392885 409 ntBASIC14.36□□□□□ -0.11
RBP1P09455 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.36□□□□□ -0.11
RBP1P09455 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
RBP1P09455 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC14.36□□□□□ -0.11
RBP1P09455 AP006294.1-201ENST00000415407 339 ntBASIC14.36□□□□□ -0.11
RBP1P09455 C2orf27AP3-201ENST00000434123 579 ntBASIC14.36□□□□□ -0.11
RBP1P09455 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.36□□□□□ -0.11
RBP1P09455 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.36□□□□□ -0.11
RBP1P09455 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.36□□□□□ -0.11
RBP1P09455 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.36□□□□□ -0.11
RBP1P09455 TERF1P3-201ENST00000505638 1227 ntBASIC14.36□□□□□ -0.11
RBP1P09455 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.36□□□□□ -0.11
RBP1P09455 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
RBP1P09455 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RBP1P09455 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.36□□□□□ -0.11
RBP1P09455 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RBP1P09455 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 OR10B1P-201ENST00000601666 907 ntBASIC14.36□□□□□ -0.11
RBP1P09455 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.36□□□□□ -0.11
RBP1P09455 ECM1P1-201ENST00000604092 1279 ntBASIC14.36□□□□□ -0.11
RBP1P09455 AL354718.3-201ENST00000616414 581 ntBASIC14.36□□□□□ -0.11
RBP1P09455 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.36□□□□□ -0.11
RBP1P09455 CR382287.1-201ENST00000623954 586 ntBASIC14.36□□□□□ -0.11
RBP1P09455 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RBP1P09455 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.36□□□□□ -0.11
RBP1P09455 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.36□□□□□ -0.11
RBP1P09455 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
RBP1P09455 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RBP1P09455 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.35□□□□□ -0.11
RBP1P09455 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC14.35□□□□□ -0.11
RBP1P09455 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
RBP1P09455 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.35□□□□□ -0.11
RBP1P09455 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RBP1P09455 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
RBP1P09455 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.35□□□□□ -0.11
RBP1P09455 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.35□□□□□ -0.11
RBP1P09455 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 CD8B2-202ENST00000417670 633 ntBASIC14.35□□□□□ -0.11
RBP1P09455 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.35□□□□□ -0.11
RBP1P09455 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.35□□□□□ -0.11
RBP1P09455 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.35□□□□□ -0.11
RBP1P09455 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC14.35□□□□□ -0.11
RBP1P09455 MIR4745-201ENST00000577608 62 ntBASIC14.35□□□□□ -0.11
RBP1P09455 GNRHR2-203ENST00000581100 1187 ntBASIC14.35□□□□□ -0.11
RBP1P09455 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.35□□□□□ -0.11
RBP1P09455 AC027601.3-201ENST00000622907 509 ntBASIC14.35□□□□□ -0.11
RBP1P09455 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RBP1P09455 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
RBP1P09455 AL022313.4-201ENST00000562756 2046 ntBASIC14.35□□□□□ -0.11
RBP1P09455 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RBP1P09455 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.35□□□□□ -0.11
RBP1P09455 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.34□□□□□ -0.11
RBP1P09455 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RBP1P09455 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RBP1P09455 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.34□□□□□ -0.11
RBP1P09455 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms