Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RB1P06400 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC15.19■□□□□ 0.02
RB1P06400 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
RB1P06400 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
RB1P06400 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
RB1P06400 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RB1P06400 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.19■□□□□ 0.02
RB1P06400 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.19■□□□□ 0.02
RB1P06400 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.19■□□□□ 0.02
RB1P06400 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 AC104640.1-201ENST00000562617 2109 ntBASIC15.19■□□□□ 0.02
RB1P06400 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.19■□□□□ 0.02
RB1P06400 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.19■□□□□ 0.02
RB1P06400 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 KRT18P46-201ENST00000435568 1279 ntBASIC15.19■□□□□ 0.02
RB1P06400 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC15.19■□□□□ 0.02
RB1P06400 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC15.19■□□□□ 0.02
RB1P06400 RN7SL375P-201ENST00000492442 298 ntBASIC15.19■□□□□ 0.02
RB1P06400 ALG1L3P-201ENST00000503331 765 ntBASIC15.19■□□□□ 0.02
RB1P06400 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC15.19■□□□□ 0.02
RB1P06400 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.19■□□□□ 0.02
RB1P06400 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC15.19■□□□□ 0.02
RB1P06400 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC15.19■□□□□ 0.02
RB1P06400 EIF5AP2-201ENST00000585668 1047 ntBASIC15.19■□□□□ 0.02
RB1P06400 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RB1P06400 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 MSANTD2P1-201ENST00000445341 1368 ntBASIC15.19■□□□□ 0.02
RB1P06400 LINC00528-201ENST00000600723 2160 ntBASIC15.19■□□□□ 0.02
RB1P06400 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.19■□□□□ 0.02
RB1P06400 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.19■□□□□ 0.02
RB1P06400 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC15.19■□□□□ 0.02
RB1P06400 AC067931.2-201ENST00000623655 2003 ntBASIC15.19■□□□□ 0.02
RB1P06400 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
RB1P06400 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.19■□□□□ 0.02
RB1P06400 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
RB1P06400 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
RB1P06400 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.18■□□□□ 0.02
RB1P06400 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.18■□□□□ 0.02
RB1P06400 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RB1P06400 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
RB1P06400 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.18■□□□□ 0.02
RB1P06400 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC15.18■□□□□ 0.02
RB1P06400 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
RB1P06400 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RB1P06400 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
RB1P06400 KCNK18-201ENST00000334549 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC15.18■□□□□ 0.02
RB1P06400 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.18■□□□□ 0.02
RB1P06400 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC15.18■□□□□ 0.02
RB1P06400 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 BPIFB5P-201ENST00000457066 1099 ntBASIC15.18■□□□□ 0.02
RB1P06400 PFN2-212ENST00000490975 858 ntTSL 4 BASIC15.18■□□□□ 0.02
RB1P06400 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC15.18■□□□□ 0.02
RB1P06400 CISD2-202ENST00000503643 808 ntTSL 2 BASIC15.18■□□□□ 0.02
RB1P06400 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.18■□□□□ 0.02
RB1P06400 TREHP1-201ENST00000531328 465 ntBASIC15.18■□□□□ 0.02
RB1P06400 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.18■□□□□ 0.02
RB1P06400 MT2A-202ENST00000561491 581 ntTSL 2 BASIC15.18■□□□□ 0.02
RB1P06400 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC15.18■□□□□ 0.02
RB1P06400 COX5A-205ENST00000568517 582 ntTSL 3 BASIC15.18■□□□□ 0.02
RB1P06400 TRMT112P3-201ENST00000580149 358 ntBASIC15.18■□□□□ 0.02
RB1P06400 AC008972.2-201ENST00000606587 494 ntBASIC15.18■□□□□ 0.02
RB1P06400 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC15.18■□□□□ 0.02
RB1P06400 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.18■□□□□ 0.02
RB1P06400 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
RB1P06400 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.18■□□□□ 0.02
RB1P06400 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.18■□□□□ 0.02
RB1P06400 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.18■□□□□ 0.02
RB1P06400 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RB1P06400 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.18■□□□□ 0.02
RB1P06400 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms