Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
CSPG5O95196 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.64■□□□□ 0.09
CSPG5O95196 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.64■□□□□ 0.09
CSPG5O95196 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.64■□□□□ 0.09
CSPG5O95196 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.64■□□□□ 0.09
CSPG5O95196 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.64■□□□□ 0.09
CSPG5O95196 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CSPG5O95196 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.64■□□□□ 0.09
CSPG5O95196 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CSPG5O95196 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CSPG5O95196 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CSPG5O95196 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.64■□□□□ 0.09
CSPG5O95196 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.64■□□□□ 0.09
CSPG5O95196 NDUFS6P1-201ENST00000485187 316 ntBASIC15.64■□□□□ 0.09
CSPG5O95196 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.64■□□□□ 0.09
CSPG5O95196 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.64■□□□□ 0.09
CSPG5O95196 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC15.64■□□□□ 0.09
CSPG5O95196 AC093752.3-201ENST00000567343 901 ntBASIC15.64■□□□□ 0.09
CSPG5O95196 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC15.64■□□□□ 0.09
CSPG5O95196 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CSPG5O95196 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC15.64■□□□□ 0.09
CSPG5O95196 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CSPG5O95196 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CSPG5O95196 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.64■□□□□ 0.09
CSPG5O95196 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.64■□□□□ 0.09
CSPG5O95196 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.64■□□□□ 0.09
CSPG5O95196 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CSPG5O95196 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.64■□□□□ 0.09
CSPG5O95196 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.64■□□□□ 0.09
CSPG5O95196 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.64■□□□□ 0.09
CSPG5O95196 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CSPG5O95196 AC007292.2-201ENST00000593524 1812 ntBASIC15.64■□□□□ 0.09
CSPG5O95196 AC136621.1-201ENST00000624017 2304 ntBASIC15.63■□□□□ 0.09
CSPG5O95196 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC15.63■□□□□ 0.09
CSPG5O95196 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC15.63■□□□□ 0.09
CSPG5O95196 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CSPG5O95196 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CSPG5O95196 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 AC087481.3-201ENST00000602886 1894 ntBASIC15.63■□□□□ 0.09
CSPG5O95196 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.63■□□□□ 0.09
CSPG5O95196 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CSPG5O95196 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CSPG5O95196 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.63■□□□□ 0.09
CSPG5O95196 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CSPG5O95196 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CSPG5O95196 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.63■□□□□ 0.09
CSPG5O95196 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC15.63■□□□□ 0.09
CSPG5O95196 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.63■□□□□ 0.09
CSPG5O95196 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.63■□□□□ 0.09
CSPG5O95196 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CSPG5O95196 AL157792.1-201ENST00000488281 530 ntBASIC15.63■□□□□ 0.09
CSPG5O95196 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.63■□□□□ 0.09
CSPG5O95196 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.63■□□□□ 0.09
CSPG5O95196 AC141586.1-203ENST00000567242 366 ntBASIC15.63■□□□□ 0.09
CSPG5O95196 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 AC008825.2-201ENST00000603374 718 ntBASIC15.63■□□□□ 0.09
CSPG5O95196 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC15.63■□□□□ 0.09
CSPG5O95196 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.63■□□□□ 0.09
CSPG5O95196 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
CSPG5O95196 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CSPG5O95196 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 GSN-203ENST00000373808 2664 ntTSL 2 BASIC15.63■□□□□ 0.09
CSPG5O95196 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.63■□□□□ 0.09
CSPG5O95196 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
CSPG5O95196 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.63■□□□□ 0.09
CSPG5O95196 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.63■□□□□ 0.09
CSPG5O95196 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.63■□□□□ 0.09
CSPG5O95196 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.63■□□□□ 0.09
CSPG5O95196 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CSPG5O95196 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms