Protein–RNA interactions for Protein: B2RNN3

C1QTNF9B, Complement C1q and tumor necrosis factor-related protein 9B, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF9BB2RNN3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 BLVRA-201ENST00000265523 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 SNRPCP15-201ENST00000424055 192 ntBASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 STK24P1-201ENST00000455035 1291 ntBASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 AC092903.1-201ENST00000466506 262 ntBASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 AC147876.1-201ENST00000504408 322 ntBASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 RN7SL524P-201ENST00000581152 300 ntBASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 COQ4-204ENST00000608951 781 ntTSL 2 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 AC005865.2-202ENST00000635814 725 ntBASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 AC006207.1-201ENST00000637958 562 ntTSL 5 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
C1QTNF9BB2RNN3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 MIR611-201ENST00000384869 67 ntBASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AP000244.1-201ENST00000424582 201 ntBASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AC006328.1-201ENST00000437571 379 ntBASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AL773545.2-201ENST00000442149 472 ntBASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 CDK4P1-201ENST00000454213 828 ntBASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AC011431.1-201ENST00000512971 230 ntBASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 LY6E-215ENST00000523847 427 ntTSL 3 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 MBP-230ENST00000528160 584 ntTSL 5 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AC009055.1-201ENST00000562656 781 ntTSL 3 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AL133467.4-201ENST00000602953 725 ntBASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AP006248.1-201ENST00000610471 67 ntBASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AGGF1P1-201ENST00000509500 2073 ntBASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
C1QTNF9BB2RNN3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms