Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 AL138799.1-201ENST00000448213 1675 ntBASIC15.89■□□□□ 0.13
CCDC66A2RUB6 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CCDC66A2RUB6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 POM121L4P-202ENST00000427789 1891 ntBASIC15.88■□□□□ 0.13
CCDC66A2RUB6 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 AC026410.3-201ENST00000514280 936 ntBASIC15.88■□□□□ 0.13
CCDC66A2RUB6 AC009407.1-201ENST00000568958 598 ntBASIC15.88■□□□□ 0.13
CCDC66A2RUB6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 SRD5A3P1-201ENST00000603021 949 ntBASIC15.88■□□□□ 0.13
CCDC66A2RUB6 AC106028.4-201ENST00000614509 607 ntBASIC15.88■□□□□ 0.13
CCDC66A2RUB6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 MIR497HG-202ENST00000572453 3838 ntBASIC15.88■□□□□ 0.13
CCDC66A2RUB6 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CCDC66A2RUB6 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 MIR943-201ENST00000401286 94 ntBASIC15.87■□□□□ 0.13
CCDC66A2RUB6 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 AC036164.1-201ENST00000570544 333 ntBASIC15.87■□□□□ 0.13
CCDC66A2RUB6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 AC107373.2-201ENST00000607735 490 ntBASIC15.87■□□□□ 0.13
CCDC66A2RUB6 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms