Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 RNA5SP420-201ENST00000516997 137 ntBASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 IKBKB-223ENST00000522147 954 ntTSL 5 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 AL139424.3-202ENST00000641619 917 ntBASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC21.15■□□□□ 0.98
CDC42BPBQ9Y5S2 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDC42BPBQ9Y5S2 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDC42BPBQ9Y5S2 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDC42BPBQ9Y5S2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
CDC42BPBQ9Y5S2 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDC42BPBQ9Y5S2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
CDC42BPBQ9Y5S2 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 AC089987.1-201ENST00000551654 2209 ntBASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 CTSL-202ENST00000342020 933 ntTSL 2 BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 U73169.1-201ENST00000395152 367 ntBASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 KRT18P33-201ENST00000398525 1043 ntBASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 HNRNPA1P56-201ENST00000505767 954 ntBASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 BMF-206ENST00000558774 671 ntTSL 3 BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDC42BPBQ9Y5S2 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 MPV17-209ENST00000405983 859 ntTSL 5 BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 AC023141.7-201ENST00000430646 407 ntBASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDC42BPBQ9Y5S2 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 TREX1-203ENST00000456089 629 ntTSL 3 BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 AC123912.6-201ENST00000612657 315 ntBASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 AC245369.7-201ENST00000631386 350 ntBASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 AC103702.1-201ENST00000548801 2630 ntBASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 AC004801.1-201ENST00000549557 360 ntBASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 AC091304.3-201ENST00000566500 716 ntBASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 AC132812.1-201ENST00000583145 892 ntBASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 AC005746.3-201ENST00000614751 393 ntBASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 CR392039.1-201ENST00000623217 204 ntBASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDC42BPBQ9Y5S2 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms