Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
VGLL1Q99990 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
VGLL1Q99990 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 MRPS18AP1-201ENST00000414458 589 ntBASIC11.12□□□□□ -0.63
VGLL1Q99990 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC11.12□□□□□ -0.63
VGLL1Q99990 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.12□□□□□ -0.63
VGLL1Q99990 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC11.12□□□□□ -0.63
VGLL1Q99990 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 CD81-207ENST00000481687 890 ntTSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 FADS2-205ENST00000517839 469 ntTSL 3 BASIC11.12□□□□□ -0.63
VGLL1Q99990 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC11.12□□□□□ -0.63
VGLL1Q99990 AL359711.2-201ENST00000563105 872 ntBASIC11.12□□□□□ -0.63
VGLL1Q99990 AC124283.3-201ENST00000570869 594 ntBASIC11.12□□□□□ -0.63
VGLL1Q99990 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 AC004466.1-201ENST00000599515 1080 ntBASIC11.12□□□□□ -0.63
VGLL1Q99990 MIR6074-201ENST00000612054 107 ntBASIC11.12□□□□□ -0.63
VGLL1Q99990 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.12□□□□□ -0.63
VGLL1Q99990 AC090114.2-201ENST00000608477 7054 ntBASIC11.12□□□□□ -0.63
VGLL1Q99990 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 AC111170.3-201ENST00000624282 2464 ntBASIC11.12□□□□□ -0.63
VGLL1Q99990 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
VGLL1Q99990 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.12□□□□□ -0.63
VGLL1Q99990 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
VGLL1Q99990 AC023794.5-201ENST00000564380 2157 ntBASIC11.11□□□□□ -0.63
VGLL1Q99990 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC11.11□□□□□ -0.63
VGLL1Q99990 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
VGLL1Q99990 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
VGLL1Q99990 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.11□□□□□ -0.63
VGLL1Q99990 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.11□□□□□ -0.63
VGLL1Q99990 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC11.11□□□□□ -0.63
VGLL1Q99990 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.11□□□□□ -0.63
VGLL1Q99990 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.11□□□□□ -0.63
VGLL1Q99990 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.11□□□□□ -0.63
VGLL1Q99990 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC11.11□□□□□ -0.63
VGLL1Q99990 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC11.11□□□□□ -0.63
VGLL1Q99990 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
VGLL1Q99990 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
VGLL1Q99990 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC11.11□□□□□ -0.63
VGLL1Q99990 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
VGLL1Q99990 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
VGLL1Q99990 B9D1-203ENST00000395615 805 ntTSL 3 BASIC11.11□□□□□ -0.63
VGLL1Q99990 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.11□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms