Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 RN7SL33P-201ENST00000462543 342 ntBASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 GCOM2-201ENST00000509133 1104 ntBASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 LINC00244-201ENST00000625073 613 ntBASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 AC073869.2-201ENST00000417338 1026 ntBASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 RN7SL478P-201ENST00000584358 298 ntBASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
CSMD1Q96PZ7 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 AC026884.1-201ENST00000418296 457 ntBASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 AC131235.2-201ENST00000445553 1057 ntBASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 HINT1-205ENST00000508488 703 ntTSL 2 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 AC139712.1-201ENST00000378256 1875 ntBASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 AP000354.1-201ENST00000396982 456 ntBASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 PPP1R2P4-201ENST00000424051 595 ntBASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 NT5C-204ENST00000578337 582 ntTSL 2 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 AC117503.4-201ENST00000623229 1418 ntBASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 OR2T27-201ENST00000344889 954 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 ECHDC2-201ENST00000358358 1126 ntTSL 2 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 OR7E115P-201ENST00000382617 1024 ntBASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 COPS7B-204ENST00000409091 806 ntTSL 5 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 MBP-230ENST00000528160 584 ntTSL 5 BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 AC020658.6-201ENST00000623564 1870 ntBASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 AC126177.1-201ENST00000547829 2218 ntBASIC12.04□□□□□ -0.48
CSMD1Q96PZ7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 KRT8P34-201ENST00000577607 1044 ntBASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 SIGLEC22P-201ENST00000599104 714 ntBASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.03□□□□□ -0.48
CSMD1Q96PZ7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms