Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 AC103988.2-201ENST00000561804 725 ntBASIC14.06□□□□□ -0.16
VPS33AQ96AX1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 AC106028.4-201ENST00000614509 607 ntBASIC14.06□□□□□ -0.16
VPS33AQ96AX1 AP005019.2-201ENST00000615104 511 ntBASIC14.06□□□□□ -0.16
VPS33AQ96AX1 AC005252.2-201ENST00000624630 1141 ntBASIC14.06□□□□□ -0.16
VPS33AQ96AX1 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 AL731571.1-201ENST00000617058 5428 ntBASIC14.06□□□□□ -0.16
VPS33AQ96AX1 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 AC015909.5-201ENST00000624336 2266 ntBASIC14.06□□□□□ -0.16
VPS33AQ96AX1 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
VPS33AQ96AX1 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 AC072061.1-201ENST00000569710 2234 ntBASIC14.05□□□□□ -0.16
VPS33AQ96AX1 AL139385.1-201ENST00000611744 3272 ntBASIC14.05□□□□□ -0.16
VPS33AQ96AX1 KHSRPP1-201ENST00000427983 1768 ntBASIC14.05□□□□□ -0.16
VPS33AQ96AX1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 AC098850.1-201ENST00000419919 790 ntBASIC14.05□□□□□ -0.16
VPS33AQ96AX1 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.05□□□□□ -0.16
VPS33AQ96AX1 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 AC055876.2-201ENST00000531834 546 ntBASIC14.05□□□□□ -0.16
VPS33AQ96AX1 AC092552.1-201ENST00000547243 906 ntBASIC14.05□□□□□ -0.16
VPS33AQ96AX1 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 AC099568.2-201ENST00000609194 695 ntBASIC14.05□□□□□ -0.16
VPS33AQ96AX1 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 AC073548.1-201ENST00000624088 1882 ntBASIC14.05□□□□□ -0.16
VPS33AQ96AX1 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 AL365181.3-201ENST00000605886 3222 ntBASIC14.05□□□□□ -0.16
VPS33AQ96AX1 MIR497HG-202ENST00000572453 3838 ntBASIC14.05□□□□□ -0.16
VPS33AQ96AX1 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.05□□□□□ -0.16
VPS33AQ96AX1 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
VPS33AQ96AX1 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms