Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 HIST2H2BB-201ENST00000449108 381 ntBASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 AC103988.2-201ENST00000561804 725 ntBASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 MIR4741-201ENST00000579822 90 ntBASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 AC008687.7-202ENST00000637404 953 ntBASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 MYADML-201ENST00000474610 2147 ntBASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SIMC1Q8NDZ2 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 AC139712.1-201ENST00000378256 1875 ntBASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 AC011498.7-201ENST00000624986 2027 ntBASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 PUDPP3-201ENST00000445368 636 ntBASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 BNIP3P42-201ENST00000454982 569 ntBASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 BNIP3P29-201ENST00000598302 571 ntBASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 AC011447.5-201ENST00000616168 564 ntBASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 COX11-210ENST00000639671 696 ntBASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 CICP16-201ENST00000502609 2813 ntBASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SIMC1Q8NDZ2 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms