Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ZIC4Q8N9L1 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 AL928921.2-201ENST00000641325 2442 ntBASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 MIR1247-201ENST00000408206 136 ntBASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 GPAA1P2-201ENST00000417923 928 ntBASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 KRT8P13-201ENST00000463294 1010 ntBASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 AC125604.1-201ENST00000496255 707 ntBASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 AL645939.5-201ENST00000606834 243 ntBASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 AL157813.1-201ENST00000612996 587 ntBASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 AL591471.1-201ENST00000621855 229 ntBASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 AP002353.1-201ENST00000528257 1599 ntBASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ZIC4Q8N9L1 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 JTB-202ENST00000356648 1040 ntTSL 2 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 AC092580.1-201ENST00000433998 658 ntBASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.8□□□□□ -0.36
ZIC4Q8N9L1 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms