Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 ST13P19-201ENST00000442505 1124 ntBASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 POU5F1P2-201ENST00000521750 823 ntBASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 MIR3188-201ENST00000583494 85 ntBASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 AC020922.3-201ENST00000595064 547 ntBASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 AC107918.4-201ENST00000641966 3141 ntBASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 AC006504.5-208ENST00000588784 2401 ntBASIC13.47□□□□□ -0.25
H3F3CQ6NXT2 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 AC007274.2-201ENST00000421675 662 ntBASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 AC134698.3-201ENST00000523880 214 ntBASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.46□□□□□ -0.25
H3F3CQ6NXT2 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms