Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 GHET1-201ENST00000627071 1906 ntBASIC13.74□□□□□ -0.21
LPCAT4Q643R3 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 AC010970.1-201ENST00000445125 1848 ntBASIC13.74□□□□□ -0.21
LPCAT4Q643R3 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 AC012531.1-201ENST00000562848 2680 ntBASIC13.74□□□□□ -0.21
LPCAT4Q643R3 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 MRPL37P1-201ENST00000592451 1337 ntBASIC13.74□□□□□ -0.21
LPCAT4Q643R3 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 AC003101.2-201ENST00000612557 442 ntBASIC13.74□□□□□ -0.21
LPCAT4Q643R3 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 GLIS3-202ENST00000381971 3961 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.74□□□□□ -0.21
LPCAT4Q643R3 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
LPCAT4Q643R3 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 AC110048.1-201ENST00000604293 2157 ntBASIC13.73□□□□□ -0.21
LPCAT4Q643R3 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 PI4KAP2-201ENST00000360806 2080 ntBASIC13.73□□□□□ -0.21
LPCAT4Q643R3 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 KRT17P5-202ENST00000444070 2552 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 BAP1-211ENST00000615113 489 ntBASIC13.73□□□□□ -0.21
LPCAT4Q643R3 AC055717.3-201ENST00000622967 595 ntBASIC13.73□□□□□ -0.21
LPCAT4Q643R3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 AGGF1P10-201ENST00000635005 2191 ntBASIC13.73□□□□□ -0.21
LPCAT4Q643R3 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
LPCAT4Q643R3 WTH3DI-201ENST00000623617 3032 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms