Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
RAE1P78406 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 AC079178.1-201ENST00000420915 656 ntBASIC13.76□□□□□ -0.21
RAE1P78406 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.76□□□□□ -0.21
RAE1P78406 HLA-V-201ENST00000429037 534 ntBASIC13.76□□□□□ -0.21
RAE1P78406 ACA64.2-201ENST00000459014 129 ntBASIC13.76□□□□□ -0.21
RAE1P78406 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.76□□□□□ -0.21
RAE1P78406 AC119751.2-201ENST00000504529 210 ntBASIC13.76□□□□□ -0.21
RAE1P78406 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.76□□□□□ -0.21
RAE1P78406 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.76□□□□□ -0.21
RAE1P78406 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
RAE1P78406 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.76□□□□□ -0.21
RAE1P78406 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.76□□□□□ -0.21
RAE1P78406 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.76□□□□□ -0.21
RAE1P78406 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 AC244157.2-201ENST00000616239 1006 ntBASIC13.76□□□□□ -0.21
RAE1P78406 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RAE1P78406 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
RAE1P78406 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RAE1P78406 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RAE1P78406 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.76□□□□□ -0.21
RAE1P78406 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.76□□□□□ -0.21
RAE1P78406 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.76□□□□□ -0.21
RAE1P78406 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RAE1P78406 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.76□□□□□ -0.21
RAE1P78406 CETP-203ENST00000566128 1733 ntTSL 5 BASIC13.76□□□□□ -0.21
RAE1P78406 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 CYP4F23P-201ENST00000593402 1579 ntBASIC13.75□□□□□ -0.21
RAE1P78406 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 LAP3P2-201ENST00000454686 1454 ntBASIC13.75□□□□□ -0.21
RAE1P78406 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.75□□□□□ -0.21
RAE1P78406 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.75□□□□□ -0.21
RAE1P78406 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 AL354877.1-201ENST00000424412 413 ntBASIC13.75□□□□□ -0.21
RAE1P78406 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.75□□□□□ -0.21
RAE1P78406 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.75□□□□□ -0.21
RAE1P78406 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.75□□□□□ -0.21
RAE1P78406 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.75□□□□□ -0.21
RAE1P78406 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.75□□□□□ -0.21
RAE1P78406 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.75□□□□□ -0.21
RAE1P78406 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.75□□□□□ -0.21
RAE1P78406 AC005962.1-201ENST00000584100 773 ntBASIC13.75□□□□□ -0.21
RAE1P78406 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.75□□□□□ -0.21
RAE1P78406 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC13.75□□□□□ -0.21
RAE1P78406 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.75□□□□□ -0.21
RAE1P78406 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RAE1P78406 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
RAE1P78406 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RAE1P78406 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RAE1P78406 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.75□□□□□ -0.21
RAE1P78406 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
RAE1P78406 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.75□□□□□ -0.21
RAE1P78406 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.75□□□□□ -0.21
RAE1P78406 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
RAE1P78406 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.75□□□□□ -0.21
RAE1P78406 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RAE1P78406 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.74□□□□□ -0.21
RAE1P78406 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.74□□□□□ -0.21
RAE1P78406 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RAE1P78406 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RAE1P78406 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RAE1P78406 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.74□□□□□ -0.21
RAE1P78406 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
RAE1P78406 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.74□□□□□ -0.21
RAE1P78406 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.74□□□□□ -0.21
RAE1P78406 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RAE1P78406 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.74□□□□□ -0.21
RAE1P78406 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RAE1P78406 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.74□□□□□ -0.21
RAE1P78406 AL160314.3-201ENST00000556041 767 ntBASIC13.74□□□□□ -0.21
RAE1P78406 AC100827.2-201ENST00000563214 1194 ntBASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms