Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
TRA2BP62995 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TRA2BP62995 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.71□□□□□ -0.22
TRA2BP62995 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.71□□□□□ -0.22
TRA2BP62995 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRA2BP62995 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRA2BP62995 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRA2BP62995 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC13.71□□□□□ -0.22
TRA2BP62995 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
TRA2BP62995 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.71□□□□□ -0.22
TRA2BP62995 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRA2BP62995 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRA2BP62995 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.7□□□□□ -0.22
TRA2BP62995 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 AHCYP4-201ENST00000419201 1315 ntBASIC13.7□□□□□ -0.22
TRA2BP62995 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC13.7□□□□□ -0.22
TRA2BP62995 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
TRA2BP62995 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.7□□□□□ -0.22
TRA2BP62995 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.7□□□□□ -0.22
TRA2BP62995 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.7□□□□□ -0.22
TRA2BP62995 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.7□□□□□ -0.22
TRA2BP62995 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TRA2BP62995 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.7□□□□□ -0.22
TRA2BP62995 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC13.7□□□□□ -0.22
TRA2BP62995 AC006122.1-201ENST00000493323 440 ntBASIC13.7□□□□□ -0.22
TRA2BP62995 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.7□□□□□ -0.22
TRA2BP62995 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.7□□□□□ -0.22
TRA2BP62995 AC022217.1-201ENST00000521069 738 ntBASIC13.7□□□□□ -0.22
TRA2BP62995 AC003686.1-201ENST00000550956 1034 ntBASIC13.7□□□□□ -0.22
TRA2BP62995 AL160314.3-201ENST00000556041 767 ntBASIC13.7□□□□□ -0.22
TRA2BP62995 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.7□□□□□ -0.22
TRA2BP62995 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.7□□□□□ -0.22
TRA2BP62995 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.7□□□□□ -0.22
TRA2BP62995 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.7□□□□□ -0.22
TRA2BP62995 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TRA2BP62995 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.7□□□□□ -0.22
TRA2BP62995 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.7□□□□□ -0.22
TRA2BP62995 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.7□□□□□ -0.22
TRA2BP62995 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TRA2BP62995 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRA2BP62995 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.69□□□□□ -0.22
TRA2BP62995 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRA2BP62995 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
TRA2BP62995 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.69□□□□□ -0.22
TRA2BP62995 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
TRA2BP62995 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
TRA2BP62995 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.69□□□□□ -0.22
TRA2BP62995 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.69□□□□□ -0.22
TRA2BP62995 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.69□□□□□ -0.22
TRA2BP62995 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 MTX1P1-201ENST00000440904 838 ntBASIC13.69□□□□□ -0.22
TRA2BP62995 Z93015.1-201ENST00000451718 390 ntBASIC13.69□□□□□ -0.22
TRA2BP62995 KRT18P15-201ENST00000458108 1291 ntBASIC13.69□□□□□ -0.22
TRA2BP62995 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.69□□□□□ -0.22
TRA2BP62995 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
TRA2BP62995 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.69□□□□□ -0.22
TRA2BP62995 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.69□□□□□ -0.22
TRA2BP62995 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TRA2BP62995 AC140658.4-201ENST00000561990 352 ntBASIC13.69□□□□□ -0.22
TRA2BP62995 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.69□□□□□ -0.22
TRA2BP62995 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms