Protein–RNA interactions for Protein: P59665

DEFA1, Neutrophil defensin 1, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA1P59665 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
DEFA1P59665 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
DEFA1P59665 COL12A1-202ENST00000345356 5886 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
DEFA1P59665 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC12.77□□□□□ -0.36
DEFA1P59665 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.77□□□□□ -0.37
DEFA1P59665 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC12.77□□□□□ -0.37
DEFA1P59665 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC12.77□□□□□ -0.37
DEFA1P59665 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.77□□□□□ -0.37
DEFA1P59665 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
DEFA1P59665 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
DEFA1P59665 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.77□□□□□ -0.37
DEFA1P59665 AC108073.2-201ENST00000464002 357 ntBASIC12.77□□□□□ -0.37
DEFA1P59665 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.77□□□□□ -0.37
DEFA1P59665 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
DEFA1P59665 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
DEFA1P59665 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
DEFA1P59665 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC12.77□□□□□ -0.37
DEFA1P59665 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC12.77□□□□□ -0.37
DEFA1P59665 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC12.77□□□□□ -0.37
DEFA1P59665 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.77□□□□□ -0.37
DEFA1P59665 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.77□□□□□ -0.37
DEFA1P59665 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 AC073508.3-201ENST00000619697 1419 ntBASIC12.77□□□□□ -0.37
DEFA1P59665 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.77□□□□□ -0.37
DEFA1P59665 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 BAIAP2L1-201ENST00000005260 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
DEFA1P59665 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.77□□□□□ -0.37
DEFA1P59665 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
DEFA1P59665 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
DEFA1P59665 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.77□□□□□ -0.37
DEFA1P59665 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
DEFA1P59665 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.77□□□□□ -0.37
DEFA1P59665 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
DEFA1P59665 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.77□□□□□ -0.37
DEFA1P59665 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA1P59665 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 PER1-211ENST00000581082 4521 ntTSL 5 BASIC12.76□□□□□ -0.37
DEFA1P59665 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.76□□□□□ -0.37
DEFA1P59665 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 ERCC6L2-201ENST00000288985 4564 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA1P59665 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
DEFA1P59665 FAM220BP-201ENST00000377689 816 ntBASIC12.76□□□□□ -0.37
DEFA1P59665 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA1P59665 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.76□□□□□ -0.37
DEFA1P59665 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.76□□□□□ -0.37
DEFA1P59665 AP002383.4-201ENST00000442518 975 ntBASIC12.76□□□□□ -0.37
DEFA1P59665 AC063952.2-201ENST00000498792 1227 ntBASIC12.76□□□□□ -0.37
DEFA1P59665 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.76□□□□□ -0.37
DEFA1P59665 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA1P59665 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA1P59665 AC006011.2-201ENST00000621313 1158 ntBASIC12.76□□□□□ -0.37
DEFA1P59665 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA1P59665 CASC15-204ENST00000606197 3969 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA1P59665 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
DEFA1P59665 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
DEFA1P59665 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.76□□□□□ -0.37
DEFA1P59665 MTMR3-202ENST00000333027 8906 ntTSL 5 BASIC12.76□□□□□ -0.37
DEFA1P59665 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
DEFA1P59665 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.76□□□□□ -0.37
DEFA1P59665 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
DEFA1P59665 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
DEFA1P59665 LINC01165-201ENST00000445190 1623 ntBASIC12.76□□□□□ -0.37
DEFA1P59665 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.76□□□□□ -0.37
DEFA1P59665 EPB41L1-206ENST00000373950 3631 ntTSL 5 BASIC12.76□□□□□ -0.37
DEFA1P59665 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
DEFA1P59665 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
DEFA1P59665 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms