Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CPT1AP50416 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
CPT1AP50416 TCAF2P1-201ENST00000291129 2421 ntBASIC15.94■□□□□ 0.14
CPT1AP50416 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.94■□□□□ 0.14
CPT1AP50416 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.94■□□□□ 0.14
CPT1AP50416 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC15.94■□□□□ 0.14
CPT1AP50416 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CPT1AP50416 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CPT1AP50416 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC15.93■□□□□ 0.14
CPT1AP50416 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CPT1AP50416 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CPT1AP50416 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CPT1AP50416 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.93■□□□□ 0.14
CPT1AP50416 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CPT1AP50416 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 LINC00265-2P-201ENST00000413372 782 ntBASIC15.93■□□□□ 0.14
CPT1AP50416 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC15.93■□□□□ 0.14
CPT1AP50416 RN7SL23P-201ENST00000484055 275 ntBASIC15.93■□□□□ 0.14
CPT1AP50416 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.93■□□□□ 0.14
CPT1AP50416 C2orf69P1-201ENST00000563532 1093 ntBASIC15.93■□□□□ 0.14
CPT1AP50416 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.93■□□□□ 0.14
CPT1AP50416 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.93■□□□□ 0.14
CPT1AP50416 FO393412.1-201ENST00000619841 382 ntBASIC15.93■□□□□ 0.14
CPT1AP50416 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 AC002044.2-201ENST00000624910 970 ntBASIC15.93■□□□□ 0.14
CPT1AP50416 LINC00244-201ENST00000625073 613 ntBASIC15.93■□□□□ 0.14
CPT1AP50416 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC15.93■□□□□ 0.14
CPT1AP50416 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.93■□□□□ 0.14
CPT1AP50416 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.93■□□□□ 0.14
CPT1AP50416 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC15.93■□□□□ 0.14
CPT1AP50416 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CPT1AP50416 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CPT1AP50416 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 AC067931.2-201ENST00000623655 2003 ntBASIC15.92■□□□□ 0.14
CPT1AP50416 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.92■□□□□ 0.14
CPT1AP50416 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.92■□□□□ 0.14
CPT1AP50416 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC15.92■□□□□ 0.14
CPT1AP50416 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
CPT1AP50416 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 GCSHP3-201ENST00000431120 391 ntBASIC15.92■□□□□ 0.14
CPT1AP50416 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.92■□□□□ 0.14
CPT1AP50416 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.92■□□□□ 0.14
CPT1AP50416 RNA5SP406-201ENST00000516106 112 ntBASIC15.92■□□□□ 0.14
CPT1AP50416 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.92■□□□□ 0.14
CPT1AP50416 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.92■□□□□ 0.14
CPT1AP50416 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.92■□□□□ 0.14
CPT1AP50416 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.92■□□□□ 0.14
CPT1AP50416 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.92■□□□□ 0.14
CPT1AP50416 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
CPT1AP50416 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC15.92■□□□□ 0.14
CPT1AP50416 AC138466.4-201ENST00000623965 852 ntBASIC15.92■□□□□ 0.14
CPT1AP50416 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CPT1AP50416 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CPT1AP50416 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 AC063926.3-201ENST00000624734 5658 ntBASIC15.92■□□□□ 0.14
CPT1AP50416 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CPT1AP50416 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.92■□□□□ 0.14
CPT1AP50416 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.92■□□□□ 0.14
CPT1AP50416 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CPT1AP50416 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CPT1AP50416 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.92■□□□□ 0.14
CPT1AP50416 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
CPT1AP50416 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms