Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 GALP-202ENST00000440823 889 ntTSL 5 BASIC14.27□□□□□ -0.13
CXCL12P48061 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC14.27□□□□□ -0.13
CXCL12P48061 PTGER4P3-201ENST00000458150 252 ntBASIC14.27□□□□□ -0.13
CXCL12P48061 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CXCL12P48061 PFN2-212ENST00000490975 858 ntTSL 4 BASIC14.27□□□□□ -0.13
CXCL12P48061 CHCHD2P2-201ENST00000503744 321 ntBASIC14.27□□□□□ -0.13
CXCL12P48061 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL12P48061 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC14.27□□□□□ -0.13
CXCL12P48061 MBP-238ENST00000580402 915 ntTSL 5 BASIC14.27□□□□□ -0.13
CXCL12P48061 MIR4265-201ENST00000582152 99 ntBASIC14.27□□□□□ -0.13
CXCL12P48061 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC14.27□□□□□ -0.13
CXCL12P48061 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC14.27□□□□□ -0.13
CXCL12P48061 AL009176.1-201ENST00000607876 650 ntBASIC14.27□□□□□ -0.13
CXCL12P48061 AP000769.1-203ENST00000637245 208 ntBASIC14.27□□□□□ -0.13
CXCL12P48061 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CXCL12P48061 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL12P48061 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL12P48061 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CXCL12P48061 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL12P48061 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL12P48061 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.27□□□□□ -0.13
CXCL12P48061 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.27□□□□□ -0.13
CXCL12P48061 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
CXCL12P48061 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CXCL12P48061 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
CXCL12P48061 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CXCL12P48061 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CXCL12P48061 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CXCL12P48061 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
CXCL12P48061 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.26□□□□□ -0.13
CXCL12P48061 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL12P48061 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL12P48061 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL12P48061 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL12P48061 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 PGAM2-201ENST00000297283 857 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CXCL12P48061 UROS-201ENST00000368774 744 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL12P48061 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC14.26□□□□□ -0.13
CXCL12P48061 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CXCL12P48061 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC14.26□□□□□ -0.13
CXCL12P48061 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 KRT18P4-201ENST00000422599 1288 ntBASIC14.26□□□□□ -0.13
CXCL12P48061 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 AL929302.1-201ENST00000426556 871 ntBASIC14.26□□□□□ -0.13
CXCL12P48061 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CXCL12P48061 RPL3P5-201ENST00000441645 1232 ntBASIC14.26□□□□□ -0.13
CXCL12P48061 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL12P48061 PRSS3P1-201ENST00000503996 742 ntBASIC14.26□□□□□ -0.13
CXCL12P48061 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
CXCL12P48061 AC092862.1-201ENST00000541534 533 ntBASIC14.26□□□□□ -0.13
CXCL12P48061 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC14.26□□□□□ -0.13
CXCL12P48061 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL12P48061 CES1P2-201ENST00000566467 1242 ntBASIC14.26□□□□□ -0.13
CXCL12P48061 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC14.26□□□□□ -0.13
CXCL12P48061 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC14.26□□□□□ -0.13
CXCL12P48061 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC14.26□□□□□ -0.13
CXCL12P48061 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC14.26□□□□□ -0.13
CXCL12P48061 AC091769.1-201ENST00000619576 568 ntBASIC14.26□□□□□ -0.13
CXCL12P48061 PLS3-210ENST00000626746 216 ntTSL 4 BASIC14.26□□□□□ -0.13
CXCL12P48061 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC14.26□□□□□ -0.13
CXCL12P48061 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC14.26□□□□□ -0.13
CXCL12P48061 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
CXCL12P48061 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL12P48061 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
CXCL12P48061 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.26□□□□□ -0.13
CXCL12P48061 CCT8L1P-201ENST00000465400 1674 ntBASIC14.26□□□□□ -0.13
CXCL12P48061 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CXCL12P48061 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
CXCL12P48061 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CXCL12P48061 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
CXCL12P48061 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CXCL12P48061 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CXCL12P48061 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL12P48061 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.25□□□□□ -0.13
CXCL12P48061 NORAD-201ENST00000565493 5339 ntBASIC14.25□□□□□ -0.13
CXCL12P48061 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.25□□□□□ -0.13
CXCL12P48061 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL12P48061 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL12P48061 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CXCL12P48061 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CXCL12P48061 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.25□□□□□ -0.13
CXCL12P48061 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
CXCL12P48061 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms