Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AC003102.2-201ENST00000589195 1469 ntBASIC14.77□□□□□ -0.04
RPA3P35244 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
RPA3P35244 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPA3P35244 FOS-202ENST00000535987 1402 ntTSL 2 BASIC14.77□□□□□ -0.04
RPA3P35244 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPA3P35244 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPA3P35244 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.77□□□□□ -0.04
RPA3P35244 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPA3P35244 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPA3P35244 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPA3P35244 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPA3P35244 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPA3P35244 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPA3P35244 ACKR1-201ENST00000368121 1240 ntBASIC14.77□□□□□ -0.05
RPA3P35244 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.77□□□□□ -0.05
RPA3P35244 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.77□□□□□ -0.05
RPA3P35244 AL512384.1-201ENST00000406683 331 ntBASIC14.77□□□□□ -0.05
RPA3P35244 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
RPA3P35244 AC004945.1-201ENST00000416738 983 ntBASIC14.77□□□□□ -0.05
RPA3P35244 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPA3P35244 AC007969.1-201ENST00000433675 447 ntBASIC14.77□□□□□ -0.05
RPA3P35244 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.77□□□□□ -0.05
RPA3P35244 AC114812.1-204ENST00000449669 728 ntBASIC14.77□□□□□ -0.05
RPA3P35244 AC007389.4-201ENST00000454674 793 ntBASIC14.77□□□□□ -0.05
RPA3P35244 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.77□□□□□ -0.05
RPA3P35244 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.77□□□□□ -0.05
RPA3P35244 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RPA3P35244 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RPA3P35244 TDH-203ENST00000531764 1110 ntBASIC14.77□□□□□ -0.05
RPA3P35244 PTP4A1P2-201ENST00000546033 454 ntBASIC14.77□□□□□ -0.05
RPA3P35244 AC005225.4-201ENST00000557330 545 ntBASIC14.77□□□□□ -0.05
RPA3P35244 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.77□□□□□ -0.05
RPA3P35244 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC14.77□□□□□ -0.05
RPA3P35244 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.77□□□□□ -0.05
RPA3P35244 AC012645.4-201ENST00000610691 1061 ntBASIC14.77□□□□□ -0.05
RPA3P35244 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC14.77□□□□□ -0.05
RPA3P35244 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.77□□□□□ -0.05
RPA3P35244 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RPA3P35244 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPA3P35244 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC14.77□□□□□ -0.05
RPA3P35244 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RPA3P35244 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
RPA3P35244 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
RPA3P35244 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RPA3P35244 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPA3P35244 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
RPA3P35244 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RPA3P35244 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.77□□□□□ -0.05
RPA3P35244 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPA3P35244 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
RPA3P35244 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RPA3P35244 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.76□□□□□ -0.05
RPA3P35244 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.76□□□□□ -0.05
RPA3P35244 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.76□□□□□ -0.05
RPA3P35244 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RPA3P35244 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 MRPL37P1-201ENST00000592451 1337 ntBASIC14.76□□□□□ -0.05
RPA3P35244 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC14.76□□□□□ -0.05
RPA3P35244 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.76□□□□□ -0.05
RPA3P35244 RNU1-114P-201ENST00000365297 166 ntBASIC14.76□□□□□ -0.05
RPA3P35244 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.76□□□□□ -0.05
RPA3P35244 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.76□□□□□ -0.05
RPA3P35244 AL139094.1-201ENST00000405549 1188 ntBASIC14.76□□□□□ -0.05
RPA3P35244 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.76□□□□□ -0.05
RPA3P35244 ACTG1P3-201ENST00000431775 1114 ntBASIC14.76□□□□□ -0.05
RPA3P35244 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.76□□□□□ -0.05
RPA3P35244 AC093433.1-201ENST00000458048 571 ntBASIC14.76□□□□□ -0.05
RPA3P35244 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RPA3P35244 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.76□□□□□ -0.05
RPA3P35244 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RPA3P35244 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RPA3P35244 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.76□□□□□ -0.05
RPA3P35244 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.76□□□□□ -0.05
RPA3P35244 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RPA3P35244 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 MIR497HG-202ENST00000572453 3838 ntBASIC14.76□□□□□ -0.05
RPA3P35244 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RPA3P35244 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms