Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 AP001267.2-201ENST00000532619 2086 ntBASIC15.97■□□□□ 0.15
CLTAP09496 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CLTAP09496 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
CLTAP09496 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.97■□□□□ 0.15
CLTAP09496 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.97■□□□□ 0.15
CLTAP09496 KHSRPP1-201ENST00000427983 1768 ntBASIC15.97■□□□□ 0.15
CLTAP09496 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLTAP09496 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLTAP09496 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLTAP09496 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLTAP09496 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLTAP09496 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLTAP09496 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLTAP09496 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.97■□□□□ 0.15
CLTAP09496 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
CLTAP09496 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.97■□□□□ 0.15
CLTAP09496 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CLTAP09496 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CLTAP09496 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.97■□□□□ 0.15
CLTAP09496 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CLTAP09496 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CLTAP09496 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.96■□□□□ 0.15
CLTAP09496 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CLTAP09496 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.96■□□□□ 0.15
CLTAP09496 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.96■□□□□ 0.15
CLTAP09496 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.96■□□□□ 0.15
CLTAP09496 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.96■□□□□ 0.15
CLTAP09496 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLTAP09496 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.96■□□□□ 0.15
CLTAP09496 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CLTAP09496 AGER-203ENST00000375065 665 ntTSL 2 BASIC15.96■□□□□ 0.15
CLTAP09496 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 NKAIN1P1-201ENST00000435754 582 ntBASIC15.96■□□□□ 0.15
CLTAP09496 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.96■□□□□ 0.15
CLTAP09496 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.96■□□□□ 0.15
CLTAP09496 AC022447.6-201ENST00000515522 438 ntBASIC15.96■□□□□ 0.15
CLTAP09496 AC044849.1-201ENST00000519737 1188 ntBASIC15.96■□□□□ 0.15
CLTAP09496 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.96■□□□□ 0.15
CLTAP09496 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.96■□□□□ 0.15
CLTAP09496 AL451050.2-201ENST00000606967 682 ntBASIC15.96■□□□□ 0.15
CLTAP09496 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.96■□□□□ 0.15
CLTAP09496 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.96■□□□□ 0.15
CLTAP09496 AC244452.3-201ENST00000636814 210 ntBASIC15.96■□□□□ 0.15
CLTAP09496 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.96■□□□□ 0.15
CLTAP09496 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
CLTAP09496 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CLTAP09496 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
CLTAP09496 AC006504.5-208ENST00000588784 2401 ntBASIC15.96■□□□□ 0.15
CLTAP09496 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC15.96■□□□□ 0.14
CLTAP09496 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLTAP09496 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLTAP09496 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLTAP09496 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
CLTAP09496 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CLTAP09496 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
CLTAP09496 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
CLTAP09496 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLTAP09496 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CLTAP09496 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
CLTAP09496 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.95■□□□□ 0.14
CLTAP09496 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLTAP09496 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
CLTAP09496 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLTAP09496 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLTAP09496 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.95■□□□□ 0.14
CLTAP09496 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLTAP09496 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLTAP09496 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLTAP09496 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
CLTAP09496 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC15.95■□□□□ 0.14
CLTAP09496 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
CLTAP09496 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CLTAP09496 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.95■□□□□ 0.14
CLTAP09496 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CLTAP09496 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLTAP09496 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLTAP09496 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
CLTAP09496 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CLTAP09496 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CLTAP09496 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms