Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.32□□□□□ -0.6
CXCL1P09341 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
CXCL1P09341 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
CXCL1P09341 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC11.32□□□□□ -0.6
CXCL1P09341 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.32□□□□□ -0.6
CXCL1P09341 MARK2P9-201ENST00000430958 1727 ntBASIC11.32□□□□□ -0.6
CXCL1P09341 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC11.32□□□□□ -0.6
CXCL1P09341 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.32□□□□□ -0.6
CXCL1P09341 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
CXCL1P09341 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 AC099521.2-201ENST00000619354 2036 ntBASIC11.31□□□□□ -0.6
CXCL1P09341 FAM214B-205ENST00000488109 2999 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CXCL1P09341 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC11.31□□□□□ -0.6
CXCL1P09341 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CXCL1P09341 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
CXCL1P09341 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CXCL1P09341 PSME3-217ENST00000622892 3183 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.31□□□□□ -0.6
CXCL1P09341 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
CXCL1P09341 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
CXCL1P09341 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC11.31□□□□□ -0.6
CXCL1P09341 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CXCL1P09341 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC11.31□□□□□ -0.6
CXCL1P09341 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC11.31□□□□□ -0.6
CXCL1P09341 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
CXCL1P09341 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 MIR1224-201ENST00000408193 85 ntBASIC11.31□□□□□ -0.6
CXCL1P09341 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.31□□□□□ -0.6
CXCL1P09341 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.31□□□□□ -0.6
CXCL1P09341 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.31□□□□□ -0.6
CXCL1P09341 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.31□□□□□ -0.6
CXCL1P09341 ACTG1P14-201ENST00000446382 1122 ntBASIC11.31□□□□□ -0.6
CXCL1P09341 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.31□□□□□ -0.6
CXCL1P09341 AC079140.1-201ENST00000508039 487 ntBASIC11.31□□□□□ -0.6
CXCL1P09341 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.31□□□□□ -0.6
CXCL1P09341 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC11.31□□□□□ -0.6
CXCL1P09341 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
CXCL1P09341 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.31□□□□□ -0.6
CXCL1P09341 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC11.31□□□□□ -0.6
CXCL1P09341 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.31□□□□□ -0.6
CXCL1P09341 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.31□□□□□ -0.6
CXCL1P09341 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC11.31□□□□□ -0.6
CXCL1P09341 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 AC009474.1-201ENST00000455096 1565 ntBASIC11.31□□□□□ -0.6
CXCL1P09341 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
CXCL1P09341 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC11.31□□□□□ -0.6
CXCL1P09341 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CXCL1P09341 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC11.31□□□□□ -0.6
CXCL1P09341 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
CXCL1P09341 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC11.31□□□□□ -0.6
CXCL1P09341 MCU-204ENST00000536019 3224 ntTSL 2 BASIC11.31□□□□□ -0.6
CXCL1P09341 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.31□□□□□ -0.6
CXCL1P09341 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.31□□□□□ -0.6
CXCL1P09341 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
CXCL1P09341 AC092117.1-201ENST00000621230 3250 ntBASIC11.31□□□□□ -0.6
CXCL1P09341 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
CXCL1P09341 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CXCL1P09341 TMEM164-203ENST00000372072 4975 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
CXCL1P09341 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
CXCL1P09341 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
CXCL1P09341 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
CXCL1P09341 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC11.3□□□□□ -0.6
CXCL1P09341 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms