Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC18.55■□□□□ 0.56
COL5A2P05997 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A2P05997 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC18.55■□□□□ 0.56
COL5A2P05997 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.55■□□□□ 0.56
COL5A2P05997 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A2P05997 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
COL5A2P05997 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A2P05997 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
COL5A2P05997 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.54■□□□□ 0.56
COL5A2P05997 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A2P05997 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A2P05997 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
COL5A2P05997 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A2P05997 RNA5SP491-201ENST00000362936 118 ntBASIC18.54■□□□□ 0.56
COL5A2P05997 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC18.54■□□□□ 0.56
COL5A2P05997 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC18.54■□□□□ 0.56
COL5A2P05997 TBC1D3P6-201ENST00000505954 962 ntBASIC18.54■□□□□ 0.56
COL5A2P05997 DUT-207ENST00000559416 635 ntTSL 2 BASIC18.54■□□□□ 0.56
COL5A2P05997 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC18.54■□□□□ 0.56
COL5A2P05997 FAM187B2P-201ENST00000577135 713 ntBASIC18.54■□□□□ 0.56
COL5A2P05997 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC18.54■□□□□ 0.56
COL5A2P05997 MIR8071-1-201ENST00000616769 65 ntBASIC18.54■□□□□ 0.56
COL5A2P05997 MIR8071-2-201ENST00000616772 65 ntBASIC18.54■□□□□ 0.56
COL5A2P05997 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
COL5A2P05997 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A2P05997 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A2P05997 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A2P05997 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
COL5A2P05997 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC18.54■□□□□ 0.56
COL5A2P05997 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC18.54■□□□□ 0.56
COL5A2P05997 FAM226B-201ENST00000602508 1490 ntBASIC18.54■□□□□ 0.56
COL5A2P05997 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A2P05997 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
COL5A2P05997 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A2P05997 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A2P05997 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.54■□□□□ 0.56
COL5A2P05997 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
COL5A2P05997 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A2P05997 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
COL5A2P05997 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
COL5A2P05997 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
COL5A2P05997 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC18.53■□□□□ 0.56
COL5A2P05997 KRT8P34-201ENST00000577607 1044 ntBASIC18.53■□□□□ 0.56
COL5A2P05997 CR392039.1-201ENST00000623217 204 ntBASIC18.53■□□□□ 0.56
COL5A2P05997 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
COL5A2P05997 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC18.53■□□□□ 0.56
COL5A2P05997 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.53■□□□□ 0.56
COL5A2P05997 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC18.53■□□□□ 0.56
COL5A2P05997 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
COL5A2P05997 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
COL5A2P05997 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
COL5A2P05997 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.53■□□□□ 0.56
COL5A2P05997 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
COL5A2P05997 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
COL5A2P05997 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL5A2P05997 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC18.52■□□□□ 0.56
COL5A2P05997 GPX3-202ENST00000517973 612 ntTSL 3 BASIC18.52■□□□□ 0.56
COL5A2P05997 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL5A2P05997 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL5A2P05997 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
COL5A2P05997 KF455155.1-201ENST00000604493 303 ntBASIC18.52■□□□□ 0.56
COL5A2P05997 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC18.52■□□□□ 0.56
COL5A2P05997 GARS-210ENST00000627489 324 ntTSL 4 BASIC18.52■□□□□ 0.56
COL5A2P05997 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
COL5A2P05997 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL5A2P05997 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC18.52■□□□□ 0.56
COL5A2P05997 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL5A2P05997 AL022313.4-201ENST00000562756 2046 ntBASIC18.52■□□□□ 0.56
COL5A2P05997 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL5A2P05997 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.56
COL5A2P05997 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.52■□□□□ 0.56
COL5A2P05997 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
COL5A2P05997 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.52■□□□□ 0.56
COL5A2P05997 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
COL5A2P05997 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL5A2P05997 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
COL5A2P05997 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL5A2P05997 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC18.52■□□□□ 0.55
COL5A2P05997 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
COL5A2P05997 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
COL5A2P05997 SNCAIP-206ENST00000414317 1591 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
COL5A2P05997 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC18.52■□□□□ 0.55
COL5A2P05997 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms