Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 AC003686.1-201ENST00000550956 1034 ntBASIC14.72□□□□□ -0.05
HLA-DQB2P05538 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 AC124068.2-201ENST00000569473 1109 ntBASIC14.72□□□□□ -0.05
HLA-DQB2P05538 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 AC041040.2-201ENST00000622926 2899 ntBASIC14.72□□□□□ -0.05
HLA-DQB2P05538 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.72□□□□□ -0.05
HLA-DQB2P05538 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 AC011474.4-201ENST00000623523 2076 ntBASIC14.71□□□□□ -0.05
HLA-DQB2P05538 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 BRWD1P1-201ENST00000401091 371 ntBASIC14.71□□□□□ -0.05
HLA-DQB2P05538 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.71□□□□□ -0.05
HLA-DQB2P05538 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 HLA-J-204ENST00000495278 958 ntBASIC14.71□□□□□ -0.05
HLA-DQB2P05538 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 DRG2-220ENST00000583355 891 ntTSL 3 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 MIR6752-201ENST00000618442 71 ntBASIC14.71□□□□□ -0.05
HLA-DQB2P05538 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HLA-DQB2P05538 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DQB2P05538 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DQB2P05538 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DQB2P05538 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HLA-DQB2P05538 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HLA-DQB2P05538 LAP3P2-201ENST00000454686 1454 ntBASIC14.7□□□□□ -0.06
HLA-DQB2P05538 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms