Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AC239868.1-201ENST00000369385 493 ntBASIC15.29■□□□□ 0.04
CLDN5O00501 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 TSPY25P-201ENST00000429463 745 ntBASIC15.29■□□□□ 0.04
CLDN5O00501 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN5O00501 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 NUP210P1-202ENST00000504322 710 ntBASIC15.29■□□□□ 0.04
CLDN5O00501 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN5O00501 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN5O00501 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDN5O00501 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC15.29■□□□□ 0.04
CLDN5O00501 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN5O00501 AC021016.3-201ENST00000608367 477 ntBASIC15.29■□□□□ 0.04
CLDN5O00501 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN5O00501 MEG3_2.1-201ENST00000611456 105 ntBASIC15.29■□□□□ 0.04
CLDN5O00501 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CLDN5O00501 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN5O00501 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN5O00501 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC15.29■□□□□ 0.04
CLDN5O00501 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CLDN5O00501 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.29■□□□□ 0.04
CLDN5O00501 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN5O00501 AC117489.1-201ENST00000625169 3217 ntBASIC15.28■□□□□ 0.04
CLDN5O00501 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CLDN5O00501 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN5O00501 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN5O00501 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN5O00501 HSPA8P5-201ENST00000456928 2069 ntBASIC15.28■□□□□ 0.04
CLDN5O00501 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN5O00501 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN5O00501 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLDN5O00501 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.28■□□□□ 0.04
CLDN5O00501 NCR3-202ENST00000376071 541 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN5O00501 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 AL662890.1-201ENST00000396818 632 ntBASIC15.28■□□□□ 0.04
CLDN5O00501 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.28■□□□□ 0.04
CLDN5O00501 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN5O00501 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN5O00501 AC092580.1-201ENST00000433998 658 ntBASIC15.28■□□□□ 0.04
CLDN5O00501 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN5O00501 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN5O00501 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN5O00501 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.28■□□□□ 0.04
CLDN5O00501 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN5O00501 AC104506.1-201ENST00000609247 429 ntBASIC15.28■□□□□ 0.04
CLDN5O00501 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN5O00501 CU633904.3-201ENST00000624042 1029 ntBASIC15.28■□□□□ 0.04
CLDN5O00501 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC15.28■□□□□ 0.04
CLDN5O00501 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN5O00501 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN5O00501 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CLDN5O00501 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.28■□□□□ 0.04
CLDN5O00501 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
CLDN5O00501 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CLDN5O00501 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CLDN5O00501 LAP3P2-201ENST00000454686 1454 ntBASIC15.27■□□□□ 0.04
CLDN5O00501 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN5O00501 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CLDN5O00501 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN5O00501 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN5O00501 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
CLDN5O00501 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN5O00501 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN5O00501 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN5O00501 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN5O00501 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN5O00501 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN5O00501 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN5O00501 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CLDN5O00501 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN5O00501 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.27■□□□□ 0.04
CLDN5O00501 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.27■□□□□ 0.04
CLDN5O00501 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN5O00501 PDIA3P2-201ENST00000428073 158 ntBASIC15.27■□□□□ 0.04
CLDN5O00501 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.27■□□□□ 0.04
CLDN5O00501 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.27■□□□□ 0.04
CLDN5O00501 IMP3P2-201ENST00000489760 475 ntBASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms