Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 MIR4754-201ENST00000582477 89 ntBASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSX2IPQ9Y2D8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SSX2IPQ9Y2D8 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SSX2IPQ9Y2D8 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
SSX2IPQ9Y2D8 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SSX2IPQ9Y2D8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SSX2IPQ9Y2D8 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
SSX2IPQ9Y2D8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SSX2IPQ9Y2D8 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AC006480.2-201ENST00000609770 1337 ntBASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AP000845.1-201ENST00000581677 2131 ntBASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 TP73-201ENST00000346387 4854 ntTSL 5 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AC091046.1-201ENST00000331871 207 ntBASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AC253536.4-201ENST00000440539 267 ntBASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AC116345.2-201ENST00000512837 523 ntBASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 MIR6727-201ENST00000620702 65 ntBASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AC133540.1-201ENST00000620845 1019 ntBASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 AC023090.2-201ENST00000625182 2110 ntBASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.7■□□□□ 0.1
SSX2IPQ9Y2D8 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSX2IPQ9Y2D8 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms