Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 BRWD1P1-201ENST00000401091 371 ntBASIC12.52□□□□□ -0.41
GCM1Q9NP62 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.52□□□□□ -0.41
GCM1Q9NP62 AC010141.1-201ENST00000411585 623 ntBASIC12.52□□□□□ -0.41
GCM1Q9NP62 BTBD6P1-201ENST00000412176 1267 ntBASIC12.52□□□□□ -0.41
GCM1Q9NP62 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 AC007274.1-201ENST00000439805 662 ntBASIC12.52□□□□□ -0.41
GCM1Q9NP62 GOLGA2P4-201ENST00000441462 777 ntBASIC12.52□□□□□ -0.41
GCM1Q9NP62 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 RNF41-210ENST00000552244 716 ntTSL 3 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 REXO1L6P-201ENST00000603433 1515 ntBASIC12.52□□□□□ -0.41
GCM1Q9NP62 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
GCM1Q9NP62 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
GCM1Q9NP62 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 MIR326-201ENST00000362220 95 ntBASIC12.51□□□□□ -0.41
GCM1Q9NP62 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 RPSAP36-202ENST00000494591 1261 ntBASIC12.51□□□□□ -0.41
GCM1Q9NP62 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 AC073957.3-201ENST00000609998 6758 ntBASIC12.51□□□□□ -0.41
GCM1Q9NP62 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
GCM1Q9NP62 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
GCM1Q9NP62 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms