Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 AL157414.3-201ENST00000624276 1954 ntBASIC14.84□□□□□ -0.03
TRIM55Q9BYV6 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM55Q9BYV6 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM55Q9BYV6 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.83□□□□□ -0.03
TRIM55Q9BYV6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.83□□□□□ -0.03
TRIM55Q9BYV6 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM55Q9BYV6 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM55Q9BYV6 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM55Q9BYV6 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.83□□□□□ -0.03
TRIM55Q9BYV6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
TRIM55Q9BYV6 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.03
TRIM55Q9BYV6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.83□□□□□ -0.03
TRIM55Q9BYV6 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRIM55Q9BYV6 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 REXO1L6P-201ENST00000603433 1515 ntBASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 AP005482.1-201ENST00000563722 1273 ntBASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 AC133552.6-201ENST00000613406 534 ntBASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 RPSAP52-203ENST00000622976 1023 ntBASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 AC015909.5-201ENST00000624336 2266 ntBASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TRIM55Q9BYV6 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRIM55Q9BYV6 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms