Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 MAX-218ENST00000557746 571 ntTSL 4 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 COX5A-205ENST00000568517 582 ntTSL 3 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 AL359091.4-201ENST00000610052 409 ntBASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 HMGB1P24-201ENST00000611897 328 ntBASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 AC064801.2-201ENST00000625052 1303 ntBASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 KRT8P18-201ENST00000413425 1445 ntBASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RTFDC1Q9BY42 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 AC026470.1-201ENST00000478038 846 ntBASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 RN7SL375P-201ENST00000492442 298 ntBASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 AC008026.2-201ENST00000495438 348 ntBASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 GOLGA2P7-209ENST00000560408 745 ntBASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 TRMT112P3-201ENST00000580149 358 ntBASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 MIR4265-201ENST00000582152 99 ntBASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 AL009176.1-201ENST00000607876 650 ntBASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 AC018695.6-201ENST00000614011 534 ntBASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 USP35-204ENST00000530267 2419 ntTSL 2 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC17.37■□□□□ 0.37
RTFDC1Q9BY42 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 MTHFR-210ENST00000641407 2387 ntBASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 MIR1301-201ENST00000408518 82 ntBASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 OR52M2P-201ENST00000414298 959 ntBASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 BPIFB5P-201ENST00000457066 1099 ntBASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 CHCHD2P2-201ENST00000503744 321 ntBASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 AC090136.2-201ENST00000517809 420 ntBASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 RPS5-204ENST00000598098 536 ntTSL 2 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 AC008972.2-201ENST00000606587 494 ntBASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RTFDC1Q9BY42 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms